Topic: genomic-data-analysis Goto Github
Some thing interesting about genomic-data-analysis
Some thing interesting about genomic-data-analysis
genomic-data-analysis,The Visualization Multitool for Molecular Epidemiology and Bioinformatics
User: aaboyles
Home Page: https://aaboyles.github.io/MicrobeTrace/
genomic-data-analysis,Automated Efficient Mixed Model Association Studies - R Package
User: alexjschiffer
genomic-data-analysis,LaTex template for our sequencing clinical report
User: amcrisan
genomic-data-analysis,🌳 Human ancestry inference from genomic data
Organization: bcgsc
Home Page: https://github.com/bcgsc/ntRoot
genomic-data-analysis,An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
User: bernatgel
genomic-data-analysis,Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
Organization: biodata-fun
genomic-data-analysis,This repository is my collection of pipelines for basic GWAS analysis, written in R to simplify, please cite original tools/approaches referred in the pipelines.
User: biomguler
genomic-data-analysis,Phigaro is a scalable command-line tool for predicting phages and prophages
User: bobeobibo
genomic-data-analysis,Collection of statistical scripts, image analysis workflows, data used in publications by the Misteli Lab.
Organization: cbiit
Home Page: https://ccr.cancer.gov/Laboratory-of-Receptor-Biology-and-Gene-Expression/tom-misteli
genomic-data-analysis,Script to cluster Paired End Tags (PETs) from chromatin conformation capture (3C) experiments
Organization: cellular-genomics
genomic-data-analysis,FIREcaller: Python library for detecting Frequently Interacting REgions (FIREs) from Hi-C data
Organization: cellular-genomics
genomic-data-analysis,An optimization-based mechanism :dna: :closed_lock_with_key: to selectively hide the minimum number of overlapping SNPs among the family members :family_man_woman_girl_boy: who participated in the genomic studies (i.e. GWAS). Our goal is to distort the dependencies among the family members in the original database for achieving better privacy without significantly degrading the data utility.
Organization: cmu-safari
genomic-data-analysis,A NGS analysis framework for WGS data, which automates the entire process of spinning up AWS EC2 spot instances and processing FASTQ to snvVCF in <60m, for dollars a sample and achieving Fscores of 0.998.
Organization: daylily-informatics
Home Page: http://daylilyinformatics.com
genomic-data-analysis,FAIR genomic tracks search and curation engine
Organization: elixir-oslo
Home Page: https://trackfind.elixir.no/
genomic-data-analysis,Python library to query and transform genomic data from indexed files
Organization: epiviz
Home Page: http://epivizfileserver.rtfd.io
genomic-data-analysis,Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array
User: fjdf
genomic-data-analysis,a framework for training sequence-level deep learning networks
Organization: functionlab
genomic-data-analysis,pCMF R package
User: gdurif
genomic-data-analysis,A utility for splitting mixed origin NGS reads with secondary or alt mappings
User: genomematt
genomic-data-analysis,PANDORA - Predictive Analytics aNd Data Oriented Research Applications :computer:
Organization: genular
Home Page: https://atomic-lab.org
genomic-data-analysis,Final Year Project Repository for correlating the personality trait with the diseases
User: gowthamv441
genomic-data-analysis,
User: hannahvmeyer
genomic-data-analysis,JAMIRA is a reproducible Workflow for Integrative Exploration of Genomic Features of prokariotes
User: icaromsc
genomic-data-analysis,Flujos de trabajos desarrollados y automatizados en el Inmegen para el procesamiento de datos genómicos y transcriptómicos.
Organization: inmegen
Home Page: https://serviciosbio.inmegen.gob.mx/
genomic-data-analysis,PCA on Genotypes
User: ishamada
genomic-data-analysis,Build DeepSea training dataset from raw data
User: jakublipinski
genomic-data-analysis,Shiny app for making and annotating Volcano plots
User: joachimgoedhart
Home Page: https://huygens.science.uva.nl/VolcaNoseR/
genomic-data-analysis,Active surveillance of newly-admitted nursing home patients for colonization of antibiotic-resistant bacteria reveals that multiple lineages have spread across southeast Michigan healthcare networks.
User: joycewang914
genomic-data-analysis,A modular annotation tool for genomic variants
Organization: karchinlab
genomic-data-analysis,H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
User: kishwarshafin
genomic-data-analysis,genomic alignment similarity search tool
User: laurentnoe
Home Page: https://bioinfo.univ-lille.fr/yass/
genomic-data-analysis,Research into statistical distributions of genomes, proteomes and reactomes
User: linas
genomic-data-analysis,Tools for exploration and analysis of biochemical data like genomics and proteins
User: mindleaving
genomic-data-analysis,[G]enomic [P]ositioning with [Py]thon
User: mt1022
Home Page: https://pypi.org/project/gppy/
genomic-data-analysis,memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping
User: muellan
genomic-data-analysis,Genestrip - Efficient read classification, filtering and k-mer counting for selected groups of species
User: pfeiferd
genomic-data-analysis,Generating a weighed average of LDSTORE matrices for locus-based fine-mapping.
User: pintaius
genomic-data-analysis,Scripts created at CSU as a PhD student for genomic annotations and comparisons.
User: plantdr430
genomic-data-analysis,iPat allows you to perform GWAS and GS with drags and clicks!
User: poissonfish
Home Page: http://poissonfish.github.io/iPat/
genomic-data-analysis,Genome Contact Map Explorer - gcMapExplorer. Visit:
User: rjdkmr
Home Page: http://gcmapexplorer.readthedocs.io/
genomic-data-analysis,Run Sentieon pipelines on Google Cloud Platform
Organization: sentieon
Home Page: https://cloud.google.com/genomics/docs/tutorials/sentieon
genomic-data-analysis,Team Genomics One is a group of Bioinformatics enthusiasts gathered together from around the globe , to learn and move forward in solving biological myths by analyzing various types of biological data. We believe Team Work is Dream Work!!!
User: sooraj14072001
genomic-data-analysis,Genomic data analysis suite
Organization: tanaylab
Home Page: https://tanaylab.github.io/misha/
genomic-data-analysis,grur: an R package tailored for RADseq data imputations
User: thierrygosselin
Home Page: https://thierrygosselin.github.io/grur/
genomic-data-analysis,RADseq Data Exploration, Manipulation and Visualization using R
User: thierrygosselin
Home Page: https://thierrygosselin.github.io/radiator/
genomic-data-analysis,stackr: an R package to run stacks software pipeline
User: thierrygosselin
Home Page: http://thierrygosselin.github.io/stackr/
genomic-data-analysis,R package: Simulate Expression data from igraph network using mvtnorm (CRAN; JOSS)
User: tomkellygenetics
genomic-data-analysis,Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)
User: xinglab-ai
Home Page: https://www.nature.com/articles/s41467-023-36383-6
genomic-data-analysis,Fast and precise comparison of genomes and metagenomes (in the order of terabytes) on a typical personal laptop
User: zhaoxiaofei
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