Topic: radseq Goto Github
Some thing interesting about radseq
Some thing interesting about radseq
radseq,This repository contains a number of bash and R scripts used in the processing of RADSeq data on the VSC supercomputer.
User: alexfhart
radseq,Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution. 2018;9:439–446.
User: alexkychen
Home Page: http://alexkychen.github.io/assignPOP/
radseq,Random scripts for dealing with ddRAD data, including output from pyRAD
User: btmartin721
radseq,Genomics pipeline to reproduce the analysis from Matthey-Doret et al., 2019, Genome Biology and Evolution
User: cmdoret
radseq,Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)
User: edgardomortiz
radseq,Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)
User: edgardomortiz
radseq,GBS workflow using dDocent. This was designed to process GBS data from SEACONNECT project.
User: grelot
radseq,R script employed in the manuscript 'Genomic signatures of clonality in the deep water kelp Laminaria rodriguezii' to compute the frequency of pairwise genetic distances among individuals.
User: lauricreynes
radseq,R script employed in the manuscript 'Genomic signatures of clonality in the deep water kelp Laminaria rodriguezii' to compute the distribution of FIS across loci into discrete classes
User: lauricreynes
radseq,Electronic notebook for "Deep reefs are not universal refuges: reseeding potential varies among coral species" (Science Advances, 2017)
User: pimbongaerts
Home Page: http://advances.sciencemag.org/content/3/2/e1602373
radseq,Collection of Python scripts for parsing/analyses of RAD-seq data
User: pimbongaerts
radseq,Analyse RAD-tags and generate the Genetic Map with GWAS
User: pseudogene
radseq,Population assignment analysis using R
User: thierrygosselin
Home Page: http://thierrygosselin.github.io/assigner
radseq,Populations genomics in R, Workshop in Hobart, Tasmania
User: thierrygosselin
radseq,grur: an R package tailored for RADseq data imputations
User: thierrygosselin
Home Page: https://thierrygosselin.github.io/grur/
radseq,RADseq Data Exploration, Manipulation and Visualization using R
User: thierrygosselin
Home Page: https://thierrygosselin.github.io/radiator/
radseq,stackr: an R package to run stacks software pipeline
User: thierrygosselin
Home Page: http://thierrygosselin.github.io/stackr/
radseq,Assembly, analysis and visualization of ddRAD seq data for the plant genus Muscari.
User: timboeh
radseq,Random scripts, mostly for dealing with RADseq data and DNA sequence alignments
User: tkchafin
radseq,Set of scripts to process RAD-Seq HTS data on computing grids like MetaCentrum.
User: v-z
Home Page: https://github.com/V-Z/RAD-Seq-scripts
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