Topic: reactome Goto Github
Some thing interesting about reactome
Some thing interesting about reactome
reactome,Converting SBGN encoded pathways to the SIF file format
User: arnaudporet
reactome,Integration of pathway-related information from Reactome in BEL
Organization: bio2bel
Home Page: http://bio2bel-reactome.rtfd.io
reactome,pathfinder http://reactome.org/ graph binding
Organization: caleydo
reactome,GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
User: decodebiology
reactome,A compilation of pathway gene sets
User: dhimmel
Home Page: https://doi.org/10.15363/thinklab.d72
reactome,Explore biomolecular pathways in Reactome from the command-line or a Python script
User: dvklopfenstein
reactome,Deposited R scripts allow to execute a complete RNA-seq Pipeline, starting from sequence reads (FASTQ files) to mapping/annotate the genome using a reference, to counts the number of reads for every gene. when raw counts are obtained, DESeq2 module permits to find differentially expressed genes (DEG) and to perform statistical analysis. The last module of the project allows you to use clusterprofiler in order to perform ORA and GSEA analysis (over-representation analysis and gene set enrichment analysis) using GeneOntology (GO), disease ontology (DO), KEGG, reactome eg...
User: francescopatane96
reactome,A set of GO-CAMs built automatically from Reactome pathways.
Organization: geneontology
reactome,Research into statistical distributions of genomes, proteomes and reactomes
User: linas
reactome,Python implementation of a bipartite directed multigraph extracted from the Reactome biological pathway database.
User: marinoandrea
reactome,rbioapi: User-Friendly R Interface to Biologic Web Services' API
User: moosa-r
Home Page: https://rbioapi.moosa-r.com/
reactome,An example on how to use reactome Rest API
User: pasculorente
reactome,PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://github.com/PathwayAnalysisPlatform/PathwayMatcher
Organization: pathwayanalysisplatform
reactome,A research biochemical network explorer and genetic cytohistological encyclopedia.
User: richardmatzko
reactome,OrientDB graph database version of the Reactome Database
User: santo-it
reactome,Converts Reactome pathways to GPML format
Organization: wikipathways
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