Topic: pathways Goto Github
Some thing interesting about pathways
Some thing interesting about pathways
pathways,Converting KGML encoded KEGG pathways to the SIF file format
User: arnaudporet
pathways,Finding paths of interest in networks
User: arnaudporet
pathways,Converting SBGN encoded pathways to the SIF file format
User: arnaudporet
pathways,Awell's Developer Hub website.
Organization: awell-health
Home Page: https://developers.awellhealth.com/
pathways,A Bio2BEL package for integrating pathway-related information from KEGG in BEL
Organization: bio2bel
Home Page: http://bio2bel-kegg.rtfd.io
pathways,Integration of pathway-related information from Reactome in BEL
Organization: bio2bel
Home Page: http://bio2bel-reactome.rtfd.io
pathways,Integration of pathway-related information from WikiPathways in BEL
Organization: bio2bel
Home Page: http://bio2bel-wikipathways.rtfd.io
pathways,Caleydo - Visualization for Molecular Biology
Organization: caleydo
Home Page: http://caleydo.org
pathways,Pathfinder is a tool for the visual exploration of paths in large graphs.
Organization: caleydo
Home Page: http://pathfinder.caleydo.org/
pathways,Reference implementation of the paper Redundancy-aware unsupervised ranking based on game theory - application to gene enrichment analysis
User: chiarabales
pathways,A web application for exploring, analyzing, and curating pathway databases
Organization: compath
Home Page: http://compath.rtfd.io/
pathways,This repository contains the different resources derived or generated using ComPath
Organization: compath
Home Page: https://compath.github.io/compath-resources/
pathways,GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
User: decodebiology
pathways,Command-line tool to extract pathways from a GTFS dataset.
User: derhuerst
Home Page: https://github.com/derhuerst/extract-gtfs-pathways#extract-gtfs-pathways
pathways,This is the complete module you will need to get started with 100 days of Data Science by 100 days Official.
User: dethebera
Home Page: https://datascience.100days.codes
pathways,A compilation of pathway gene sets
User: dhimmel
Home Page: https://doi.org/10.15363/thinklab.d72
pathways,Export GO-CAMs to SIF (Python)
Organization: geneontology
Home Page: http://cytocam.geneontology.cloud
pathways,Graph-based modeling environment for biology, including prototype editor and services
Organization: geneontology
Home Page: http://noctua.geneontology.org/
pathways,This is the data repository for the models created and edited with the Noctua tool stack for GO.
Organization: geneontology
Home Page: http://noctua.geneontology.org/
pathways,Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)
Organization: geneontology
pathways,Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs
Organization: greenelab
pathways,Modeling heme pathogenicity and pathway dysregulation in the context of hemolytic disorders
Organization: hemekg
Home Page: https://hemekg.github.io/hemekg/
pathways,MSigDB gene sets for multiple organisms in a tidy data format
User: igordot
Home Page: https://igordot.github.io/msigdbr
pathways,pathpy is an OpenSource python package for the modeling and analysis of pathways and temporal networks using higher-order and multi-order graphical models
User: ingoscholtes
pathways,A web application to visualize and edit the pathway models represented by SBGN Process Description Notation
Organization: ivis-at-bilkent
pathways,A web application to visualize and edit pathway models
Organization: ivis-at-bilkent
Home Page: http://newteditor.org
pathways,PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
Organization: ivis-at-bilkent
Home Page: https://www.pathwaymapper.org/
pathways,A web based visualization tool for process description maps in SBGN
Organization: ivis-at-bilkent
Home Page: http://www.cs.bilkent.edu.tr/~ivis/SBGNViz_sample_app/
pathways,SyBLaRS: Systems Biology Layout & Rendering Service
Organization: ivis-at-bilkent
pathways,Computational Health Laboratory project. Computer Science Master Degree University of Pisa. A.Y. 2022/2023
User: jacoporaffi
pathways,PHOsphoproteomic dissecTiOn using Networks
User: jdrudolph
pathways,The ideal tool for exploring global marine biogeochemical cycles.
Organization: juliaocean
pathways,Testing, development environment for a new project of KN BIBS
Organization: kn-bibs
pathways,Package to calculate functional similarity between genes https://biocor.llrs.dev
User: llrs
Home Page: https://www.bioconductor.org/packages/BioCor/
pathways,Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024
Organization: mahmoodlab
pathways,PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://github.com/PathwayAnalysisPlatform/PathwayMatcher
Organization: pathwayanalysisplatform
pathways,A project for exploring differentially active signaling paths related to proteomics datasets
Organization: pathwayanddataanalysis
pathways,Harmonizing pathway databases using Biological Expression Language (BEL)
Organization: pathwaymerger
Home Page: https://pathme.scai.fraunhofer.de/
pathways,A web application for visualizing and exploring pathway knowledge in Biological Expression Language (BEL)
Organization: pathwaymerger
Home Page: https://pathme.scai.fraunhofer.de/
pathways,Computational tool for prioritizing the genetic candidates based on the protein functional and regulatory features
Organization: peltzlab-stanford
pathways,Pathway Signatures for Drug Repositioning and Discovery
Organization: ps4dr
Home Page: https://pharmacome.github.io/
pathways,Results of the manuscript
Organization: ps4dr
pathways,:fishing_pole_and_fish: Bioconductor package for pathway enrichment and depletion analysis via a Fisher's exact test on custom test sets and annotations
User: rosscm
Home Page: https://rosscm.github.io/fedup/
pathways,R client for the OmniPath web service
Organization: saezlab
Home Page: https://r.omnipathdb.org/
pathways,GRAPH Interaction from pathway Topological Environment
Organization: sales-lab
pathways,The official Pathways Hack Club website
User: thevikj
pathways,Project to convert content of WPRDF into nanopublications.
Organization: wikipathways
pathways,R package for WikiPathways API
Organization: wikipathways
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