Topic: enrichment-analysis Goto Github
Some thing interesting about enrichment-analysis
Some thing interesting about enrichment-analysis
enrichment-analysis,Microarray Analysis Pipeline in Python
User: allielarocco
enrichment-analysis,This tutorial is created for educational purpose
User: amarinderthind
enrichment-analysis,Python implementation of Spatial Analysis of Functional Enrichment (SAFE)
Organization: baryshnikova-lab
enrichment-analysis,
User: bennordick
Home Page: https://doi.org/10.1186/s12859-021-04405-z
enrichment-analysis,Source code of the R packge BgeeDB to use data from the Bgee database
Organization: bgeedb
Home Page: https://bioconductor.org/packages/BgeeDB/
enrichment-analysis,Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.
Organization: danko-lab
enrichment-analysis,GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
User: decodebiology
enrichment-analysis,A differential and enrichment analyses pipeline for bulk ATAC-seq (and RNA-seq)
User: eonurk
Home Page: https://eonurk.github.io/cinaR/
enrichment-analysis,Ready-to-use curated genesets for cinaR
User: eonurk
enrichment-analysis,A Snakemake workflow for performing genomic region set and gene set enrichment analyses using LOLA, GREAT, and GSEApy.
Organization: epigen
Home Page: https://epigen.github.io/enrichment_analysis/
enrichment-analysis,🧬 Gene analysis toolkit based on R
Organization: ganglilab
Home Page: https://www.genekitr.fun
enrichment-analysis,Get gene sets for gene enrichment analysis (GEA)
Organization: ganglilab
enrichment-analysis,Gene Set Clustering based on Functional annotation
User: genescf
enrichment-analysis,A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
Organization: gladstone-institutes
enrichment-analysis,Overrepresentation analysis for KEGG and PID pathways using community detection
Organization: greenelab
enrichment-analysis,Function Enrichment analysis and Network construction
User: guokai8
Home Page: https://guokai8.github.io/richR/
enrichment-analysis,Library for KEGG pathway enrichment analysis
User: harryhaller001
Home Page: https://keggtools.org
enrichment-analysis,MSigDB gene sets for multiple organisms in a tidy data format
User: igordot
Home Page: https://igordot.github.io/msigdbr
enrichment-analysis,Cyber Defense Plattform for security incident investigation enrichment and automatisation.
Organization: it-bgk
enrichment-analysis,Enrichment Networks for Pathway Enrichment Analysis
User: kerseviciute
enrichment-analysis,📊 An R package of RNA-seq workflow
User: kuanhao-chao
Home Page: https://doi.ieeecomputersociety.org/10.1109/TCBB.2019.2956708
enrichment-analysis,Gene Co-expression Network analysis pipeline
User: kumquatum
enrichment-analysis,rbioapi: User-Friendly R Interface to Biologic Web Services' API
User: moosa-r
Home Page: https://rbioapi.moosa-r.com/
enrichment-analysis,Code, data and results associated with the "Rare diseases cell-typing" project.
Organization: neurogenomics
enrichment-analysis,Hierarchical approach to Stabilised Independent Component Analysis
User: nicolassompairac
enrichment-analysis,HARE: Genetic Feature Enrichment Analysis Pipeline
User: ossmith
enrichment-analysis,🧬 gget enables efficient querying of genomic reference databases
Organization: pachterlab
Home Page: https://gget.bio
enrichment-analysis,R wrapper for ermineJ
Organization: pavlidislab
Home Page: https://pavlidislab.github.io/ermineR/index.html
enrichment-analysis,Cell type-specific eQTL mapping
User: pllittle
enrichment-analysis,R package for performing enrichment analysis for microbiome relative abundance data using the CBEA approach.
User: qpmnguyen
Home Page: https://qpmnguyen.github.io/CBEA/
enrichment-analysis,ReMapEnrich is a R-software package to identify significantly enriched regions from ReMap catalogues or user defined catalogues. ReMapEnrich provide functions to import any in-house catalogue, automate and plot the enrichment analysis for genomic regions.
Organization: remap-cisreg
Home Page: http://remap-cisreg.github.io/ReMapEnrich
enrichment-analysis,Python package to perform enrichment analysis from omics data.
Organization: saezlab
Home Page: https://decoupler-py.readthedocs.io/
enrichment-analysis,A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)
User: saramasarone
enrichment-analysis,A standalone interactive application for detecting biological significance on a set of genes
User: sk-sahu
Home Page: http://sk-sahu.github.io/sig-bio-shiny
enrichment-analysis,A visualization tool for Systems-Level Interactive Data Exploration
User: soumitag
enrichment-analysis,Regression with Summary Statistics.
Organization: stephenslab
Home Page: https://stephenslab.github.io/rss
enrichment-analysis,A Python package for gene network analysis
Organization: stracquadaniolab
Home Page: https://pygna.readthedocs.io
enrichment-analysis,An R package for RNAseq differential expression analysis and visualization, in an easy and reproducible way.
User: sunyumail93
enrichment-analysis,Regression with Summary Statistics exploiting Network Topology.
Organization: suwonglab
Home Page: https://suwonglab.github.io/rss-net/
enrichment-analysis,R/Shiny package for network-integrated pathway enrichment analysis
Organization: unistbig
Home Page: https://github.com/unistbig/netGO-data
enrichment-analysis,R package for identifying motif matches and motif enrichment in DNA sequences
User: wkopp
enrichment-analysis,Full results to accompany Zhu and Stephens (2018).
User: xiangzhu
Home Page: https://xiangzhu.github.io/rss-gsea/
enrichment-analysis,:books: Biomedical knowledge mining using GOSemSim and clusterProfiler
Organization: yulab-smu
Home Page: https://yulab-smu.top/biomedical-knowledge-mining-book/
enrichment-analysis,:bar_chart: A universal enrichment tool for interpreting omics data
Organization: yulab-smu
Home Page: https://yulab-smu.top/biomedical-knowledge-mining-book/
enrichment-analysis,:mask: Disease Ontology Semantic and Enrichment analysis
Organization: yulab-smu
Home Page: https://yulab-smu.top/biomedical-knowledge-mining-book/
enrichment-analysis,Visualization of Functional Enrichment Result
Organization: yulab-smu
Home Page: https://yulab-smu.top/biomedical-knowledge-mining-book/
enrichment-analysis,:stethoscope: MeSH Enrichment and Semantic analyses
Organization: yulab-smu
Home Page: https://yulab-smu.top/biomedical-knowledge-mining-book/
enrichment-analysis,Reactome Pathway Analysis
Organization: yulab-smu
Home Page: https://yulab-smu.top/biomedical-knowledge-mining-book/
enrichment-analysis,A comprehensive gene set function enrichment tool for multiple species.
User: zd105
enrichment-analysis,Gene Set Enrichment Analysis in Python
User: zqfang
Home Page: http://gseapy.rtfd.io/
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