Topic: deseq2-analysis Goto Github
Some thing interesting about deseq2-analysis
Some thing interesting about deseq2-analysis
deseq2-analysis,Bioinformatic differential expression analyses pipeline to investigate biomarkers in Parkinson disease.
User: agalhoz
deseq2-analysis,A script to analyze with DESeq2 data from Kallisto. You maybe are interested only in DESeq2 part and its analisis and representation :)
User: alruta
deseq2-analysis,Differential Expression Analysis of protein, Gene set enrichment analysis, Multi-omic factor analysis, Pathway analysis, WGCNA
User: bntechie
deseq2-analysis,Breast Cancer Dataset Analysis
User: conorheffron
Home Page: https://conorheffron.github.io/gene-expr/
deseq2-analysis,Post processing of Capture-C experiments
User: djdownes
Home Page: http://userweb.molbiol.ox.ac.uk/public/telenius/CaptureCompendium/
deseq2-analysis,Template R code for bioinformatics analysis pipeline of transcriptomic Illumina datasets
User: eriklarsen4
deseq2-analysis,https://foreverstas.github.io/DGE_workshop_rus/
User: foreverstas
deseq2-analysis,Deposited R scripts allow to execute a complete RNA-seq Pipeline, starting from sequence reads (FASTQ files) to mapping/annotate the genome using a reference, to counts the number of reads for every gene. when raw counts are obtained, DESeq2 module permits to find differentially expressed genes (DEG) and to perform statistical analysis. The last module of the project allows you to use clusterprofiler in order to perform ORA and GSEA analysis (over-representation analysis and gene set enrichment analysis) using GeneOntology (GO), disease ontology (DO), KEGG, reactome eg...
User: francescopatane96
deseq2-analysis,Analysis of B. saida full liver transcriptome data from raw reads to gene ontology.
User: gghill
deseq2-analysis,RNA-seq replication analysis.
User: glyspy
deseq2-analysis,Performing RNA-seq data analysis with DESeq2 package of bioconductor
User: hemangini09
deseq2-analysis,Automated DE analysis by DESeq2
User: kevincjnixon
deseq2-analysis,Repository containing code I have written in R.
User: mchunn-1
deseq2-analysis,Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline
User: meeranhussain
deseq2-analysis,DESeq2 Analysis of Human Airway Smooth Muscle Cells
User: meghanadutta
deseq2-analysis,Ferroptosis and antioxidant effect on stem cells
Organization: mendenlab
deseq2-analysis,Jupyter notebooks for DGE results and ontology analysis and visualisation.
User: michalbukowski
deseq2-analysis,Bulk Rna-seq Analysis
User: moha-cm
Home Page: https://moha-cm.github.io/RNAseq-Analysis/
deseq2-analysis,Tutorial for RNA sequence data processing and simple downstream analysis with Drosophila melanogaster
User: naoto-hikawa
deseq2-analysis,Basic script for RNA-seq analysis with DESeq2
User: okrawczyk
deseq2-analysis,An application for exploring and visualizing differential gene expression data created with DESeq2
User: pblumenkamp
deseq2-analysis,Differential expression analysis: DESeq2, edgeR, limma. Realized in python based on rpy2
User: peterlipan
deseq2-analysis,Differential Gene Expression analysis in R using DESeq2
User: rohan-b-84
Home Page: https://rohan-b-84.github.io/dge_analysis_using_DESeq2/
deseq2-analysis,Pipeline for RNA-seq analysis
User: rohitsuratekar
deseq2-analysis,DESeq2 Analysis and visualization of specific genes, notably Pasilla. Script aims to identify and filter differentially expressed genes and neatly store the results. The project also includes Gene Ontology (GO) and Kegg pathway analyses, providing insights into the biological processes affected by the Pasilla gene depletion.
User: scheuermann-daniel
deseq2-analysis,Performing RNA-Seq data analysis and quality control using DESeq2 in R.
User: sivkri
deseq2-analysis,This repository contains an example implementation of DESeq2 in Python.
User: sugam2001
deseq2-analysis,Off-target analysis of siRNA knock down paired with RNAseq
User: tacazares
Home Page: https://tacazares.github.io/SeedMatchR/
deseq2-analysis,Differential Gene Expression (DGE) Analysis with DESeq2 using a reference genome
Organization: tec-base-laboratory
deseq2-analysis,Part of the final project for an Intro to Bioinformatics graduate course. Using RStudio I ran DESeq2 to show differentially expressed genes between control mice and mice infected with RSV.
User: tnation1392
deseq2-analysis,Neste projeto descrevo diferentes parâmetros e opções para a execução de programas necessários à análise de Rna-Seq, além de incluir informações e opniões que possam facilitar a escolha da melhor opção que se adque à análise em questão.
User: ziul-bio
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