Topic: phage Goto Github
Some thing interesting about phage
Some thing interesting about phage
phage,Prediction of bacterial host for phage
User: ambioinformatics
phage,iGEM 19 Synthetic Biology
User: andreaskuster
Home Page: https://2019.igem.org/Team:ETH_Zurich
phage,Quick and dirty scripts for simple biology
Organization: binomica-labs
Home Page: https://binomicalabs.org
phage,Phigaro is a scalable command-line tool for predicting phages and prophages
User: bobeobibo
phage,Report, proposal, and mvp implementation of a simple tool for use in finding motifs in genome data. 🧬
User: caleb-collar
phage,code repo for mobileOG-db
User: clb21565
phage,A powerful deep learning (DL) tool and the trained models for the phage gene and protein identification with convolutional neural network (CNN).
User: cuidachao
phage,PHANOTATE: a tool to annotate phage genomes.
User: deprekate
phage,A reconfigurable machine learning pipeline for labeling ORFs/proteins in bacteriophage genomes and metagenomic data.
User: dreycey
phage,2020 International Genetically Engineered Machine competition
User: francisgrace
Home Page: https://2020.igem.org/Team:DUT_China
phage,A micro-site for teaching and learning microbiology and bacteriophage wet lab skills
User: janzheng
Home Page: https://online.phagesforglobalhealth.org
phage,Active prophage detection in metagenome sequencing read coverages
User: jlmaier12
phage,TrIdent- Transduction Identification: Automatic detection, classification and characterization of active transduction events in microbiomes.
User: jlmaier12
phage,Parse and extract genomes based on information from a csv/tsv file.
User: joshuaiszatt
Home Page: https://pypi.org/manage/project/PhindersKeepers/release/0.0.1/
phage,zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
Organization: kalan-lab
phage,This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computational approaches to predict bacteriophage–host relationships. FEMS Microbiology Reviews doi: 10.1093/femsre/fuv048
User: linsalrob
Home Page: https://edwards.flinders.edu.au
phage,The phage proteomic tree was a breakthrough in evolution, taxonomy, and phylogenetics ... but nobody realized its global importance
User: linsalrob
phage,Phage to Shark
User: m414rkie
phage,Old repository comprising code for my HTHSCI 3BM6 phage modelling project.
User: matthewcso
phage,Accelerate common Petri dish assays with AI.
User: mshamash
Home Page: https://onepetri.ai
phage,Repository containing trained YOLOv5 object detection models used within OnePetri for Petri dish and plaque detection.
User: mshamash
Home Page: https://onepetri.ai
phage,DEPRECATED: Discover divergent virus sequences, prune flanking cellular sequences, make basic report
User: mtisza1
phage,Quality of life improvement scripts for working with https://phaster.ca (PHAge Search Tool Enhanced Release)
User: naturepoker
phage,From protein to phage phylogeny in single line!
User: naturepoker
phage,.m, .MAT, .PDF, .XLS files for "Canonical host-pathogen tradeoffs subverted by mutations with dual benefits"
User: rebear217
phage,Using graph database techniques to understand the infectious relationships between bacteria and phages.
Organization: schlosslab
phage,This repository contains the data and scripts used in Simulation Study of Viral Contiguous Sequence Identification Tools
Organization: strong-lab
phage,Scripts to analyze the data for the paper "An outstanding bacterial membranome requires CRISPR-Cas systems to avoid the intervention of phages" and derive the figures or subfigures shown in the manuscript.
Organization: upobioinfo
phage,An Agent-Based Model simulating the coevolution dynamics between phages and bacteria. Was my essay in the ABM course by SFI
User: xlxs4
phage,A toy Agent-Based Model of the coevolution dynamics between bacteria and phages, with a focus on environment structure
User: xlxs4
phage,A toy MC model studying bacteria-phage coevolution dynamics. Code is meant to be readable instead of performant, or, well, good. Good for beginners in ABM
User: xlxs4
phage,Code for Next Generation Phage Display Motif Denoising and Identification
User: yitongtseo
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