Topic: illumina-sequencing Goto Github
Some thing interesting about illumina-sequencing
Some thing interesting about illumina-sequencing
illumina-sequencing,Workflow and R scripts for Giongo et al. (2024)
User: adrianagiongo
Home Page: https://www.frontiersin.org/articles/10.3389/frmbi.2024.1335791/full
illumina-sequencing,Automated pipeline for amplicon sequence analysis
User: alejandroab
illumina-sequencing,
User: arupgsh
illumina-sequencing,IMOM - A pipeline for interacting with, processing, and analyzing multi-OM datasets in phylogenetic and evolutionary context
User: awesometimetraveler
illumina-sequencing,Generate simulated illumina sequence reads from a reference sequence
Organization: bccdc-phl
illumina-sequencing,Create fastq symlinks for selected samples in sequencer output directories based on several criteria
Organization: bccdc-phl
illumina-sequencing,This is the pipeline that handles SARS-CoV-2 samples from the health sector in Region Midtjylland (Illumina PE)
User: cmkobel
illumina-sequencing,Illumina pipeline for 16S sequencing, completed in Python.
User: colleenbobbie
illumina-sequencing,Copy Number Variant Analyzer for Illumina Dragen files. Work in Progress...
User: csynodinos
illumina-sequencing,Group B Strep pipelines for large dataset gene analysis from Illumina sequencing.
User: darakibr
illumina-sequencing,LpSIM is a virtual platform for simulating the different stages of the Illumina sequencing library preparation workflow and the possible artefacts that may be introduced at each stage.
User: ebewo
illumina-sequencing,Generate a .CSV manifest file for importing multiple samples in the Illumina MiSeq machine
User: fabbrinimarco
illumina-sequencing,Parse Illumina InterOp folder
User: guillaume-gricourt
illumina-sequencing,:rocket: A sequencing simulator
User: hadrieng
Home Page: https://insilicoseq.readthedocs.io
illumina-sequencing,A quick and user-friendly pipeline to go from raw fastq data from Illumina (paired-end sequencing) to processed ASVs and Taxonomic data.
User: headonpillow
illumina-sequencing,Scripts supporting the manuscript submitted to the Molecular Ecology Resources Special Issue 'Omics for species conservation'
User: janawold1
illumina-sequencing,Illumina short read assembly data pipeline for phage
User: joshuaiszatt
Home Page: https://pypi.org/project/phanta/
illumina-sequencing,Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97
User: kerrimalone
illumina-sequencing,A pipeline for variant calling from P. falciparum short reads generated from Illumina and ONT libraries
User: kevin-wamae
illumina-sequencing,VIral GEnome ASsembly pipelines for WGS
Organization: khourious
Home Page: https://khourious.github.io/vigeas/
illumina-sequencing,Illumina (and SOLiD) sensitive read mapping tool (cloned from svn://scm.gforge.inria.fr/svnroot/storm/, original code from @marta- , with some work done by @yoann-dufresne)
User: laurentnoe
Home Page: https://bioinfo.univ-lille.fr/storm/
illumina-sequencing,
User: ljchueca
illumina-sequencing,RNA-Seq Pipeline for processing paired-end FASTQ transcripts generated from Illumina sequencing. The pipeline trims adapter sequences, aligns transcripts to a specified region of interest on the reference genome, and facilitates downstream analysis.
User: louise-la
illumina-sequencing,A systematic survey of algorithmic foundations and methodologies across 107 alignment methods (1988-2021), for both short and long reads. We provide a rigorous experimental evaluation of 11 read aligners to demonstrate the effect of these underlying algorithms on speed and efficiency of read alignment. Described by Alser et al. at https://arxiv.org/abs/2003.00110.
Organization: mangul-lab-usc
illumina-sequencing,A collection of publications on comparison of high-throughput sequencing technologies.
User: nazeeefa
illumina-sequencing,ABBA-BABA test conducted on Saccharomyces cerevisiae strains using whole-genome alignment.
User: nicolo-tellini
illumina-sequencing,Detection of Saccharomyces paradoxus DNA across Saccharomyces cerevisiae, and vice versa.
User: nicolo-tellini
illumina-sequencing,Discover VNTR-associated DELs that are hard to find using Illumina reads
User: petermchale
illumina-sequencing,๐ฆ Interleave and deinterleave FASTQ files. Streams and gzipped FASTQ files are accepted.
Organization: quadram-institute-bioscience
illumina-sequencing,Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
User: rhshah
Home Page: http://impact-pipeline.readthedocs.org/en/latest/index.html
illumina-sequencing,LDPC codes for Illumina sequencing-based DNA storage
User: shubhamchandak94
illumina-sequencing,โกโ ๏ธ Assemble bacterial isolate genomes from Illumina paired-end reads
User: tseemann
illumina-sequencing,Series of scripts to analyse 454 and Illumina sequences in SSU amplicon against MaarjAM database
User: ut-planteco
illumina-sequencing,Accompanying information to a scientific publication on the assembly of bacterial genomes using Illumina and nanopore sequencing data using Unicylcer.
User: wennj
illumina-sequencing,A modernized ART for Illumina read simulation.
User: yu-zhejian
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