Topic: pdb-files Goto Github
Some thing interesting about pdb-files
Some thing interesting about pdb-files
pdb-files,Cython implementation of PDB -> DataFrame parsing
User: a-r-j
pdb-files, CrossLinX is the acronym of protein CrossLINks eXplorer.
User: aalhossary
pdb-files,Working with molecular structures in pandas DataFrames
Organization: biopandas
Home Page: https://BioPandas.github.io/biopandas/
pdb-files,A comprehensive library for computational molecular biology
Organization: biotite-dev
Home Page: https://www.biotite-python.org
pdb-files,Standalone program to download PDB Symbol files for debugging without WDK
User: biswa96
pdb-files,Small class to parse debug info from PEs, download their respective PDBs from the Microsoft Public Symbol Server and calculate RVAs of functions
User: broihon
pdb-files,PDB file parser and prepare tools.
Organization: continuous-symmetry-measure
pdb-files,Bisect protein file (PDB) into sub units (i.e amino acids)
Organization: continuous-symmetry-measure
pdb-files,Simple awk script to transfer properties indexed by amino acid type to a Bfactor column of the pdb file.
User: dmflab
pdb-files,Antimicrobial activity prediction for fungal effector candidates
User: fantin-mesny
pdb-files,A console application for the estimation of the primary and secondary structure's elements. Input should be the FASTA-formatted "ss.txt" file generated by PDB database.
User: gkoulouras
Home Page: http://apps.grigoriskoulouras.com/software/seqsecanalyzer_ver_1.0.zip
pdb-files,Dump content of PDB files (program databases) in JSON, XML, SQLite3, CSV etc.
User: gu1729
pdb-files,Python code to automatically interact with PDBePISA web server
User: hocinebib
pdb-files,PDBRipper is a utility for extract an information from PDB-files.
User: horsicq
pdb-files,A bunch of parsers for PE and PDB formats in C++
User: hoshimin
pdb-files,pmUE (Protein Modelling Unreal Engine) - a repo for constructing a molecule visualizer plugin in Unreal
User: isdementyev
pdb-files,collect statistics from the entire PDB library
User: jewettaij
Home Page: http://www.moltemplate.org
pdb-files,Benchmarking common tasks on proteins in various languages and packages
User: jgreener64
pdb-files,Convert in batch CIF files to PDB
User: jmb-scripts
pdb-files,A Python script to map PDB ID + chain ID to UniProt ID.
User: johnnytam100
pdb-files,A script able to extract ligands from pdb structure(s) and remove them from the original structure. The ligands are identified according to the *valid* ligands found in the binding MOAD database. The ligand can be extracted as a pdb or as a xyz (coordinate) file. Other options such as converting the queried pdb to pqr are available .
User: lucagl
pdb-files,defines the interface region of a protein complex making possible to calculate the i_rmsd between native and predicted structures following the CAPRI criteria
User: matheuspokkkk
pdb-files,An open library for the analysis of molecular dynamics trajectories
Organization: mdtraj
Home Page: http://mdtraj.org
pdb-files,PDB Viewer powered by Rust + WASM, high performance, no backend. https://pdbview.metaworm.site/ http://pdb.metaworm.site/
User: metaworm
Home Page: https://pdbview.metaworm.site/
pdb-files,A sample tool for users of Microsoft SQL Server to aid in troubleshooting otherwise difficult to diagnose issues. Provided AS-IS - see SUPPORT.md.
Organization: microsoft
pdb-files,Tools for exploration and analysis of biochemical data like genomics and proteins
User: mindleaving
pdb-files,Data Analysis of MD Simulation
User: mitradip
pdb-files,pdb-mode is an emacs-lisp minor mode for Emacs to perform a number of useful editing functions on Protein DataBank (PDB) formatted files. XEmacs and/or GNU Emacs are available for most computing platforms.
User: mmagnus
Home Page: http://crystal.scb.uwa.edu.au/charlie/software/pdb-mode/
pdb-files,pyRosseta Workshop
User: mmp1100000
pdb-files,VSCode Extension for interactively visualising protein structure data in the editor
Organization: molstar
pdb-files,Automated construction of atomistic and coarse-grained models in the PDB format for polymer peptide conjugates.
User: moritzobenauer
pdb-files,A Java wrapper for the RCSB PDB REST APIs
User: ning-y
pdb-files,Search for new PDB structures corresponding to a search term and deposited after a certain date.
User: normcyr
pdb-files,Benchmark for the most popular managed PDB readers.
User: omerraviv
pdb-files,Library containing code to manipulate mmCIF and PDB files
Organization: pdb-redo
Home Page: https://pdb-redo.github.io/libcifpp/
pdb-files,Viewer for PDB files using JavaFX GUI. Supports 3D view of any protein including cartoon view etc.
User: pgrupp
pdb-files,The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
Organization: pombertlab
pdb-files,macromolecular crystallography library and utilities
Organization: project-gemmi
Home Page: https://project-gemmi.github.io/
pdb-files,Clickable PDB statistics: synchrotrons and MX software
Organization: project-gemmi
Home Page: https://project-gemmi.github.io/pdb-stats/
pdb-files,Parts of Gemmi in WebAssembly.
Organization: project-gemmi
pdb-files,A script to generate a tripeptide database. At present, the amino acids of tripeptides produced are not complete
User: qdcvd
pdb-files,Using VMD and NAMD for molecular dynamics simulation of protein PDB files.
User: sarah-hesham-2022
pdb-files,TCL-TK for VMD.
User: sarah-hesham-2022
pdb-files,Protein Visualization using Unity and C# analysis on PDB Files.
User: sarah-hesham-2022
pdb-files,calculating radii of gyration of proteins from .pdb files
User: shivchitinous
pdb-files,Fast and cross-platform parser for Microsoft PDB files
User: smx-smx
pdb-files,Visualization of proteins directly from the PDB database or from a .pdb file.
User: spenhouet
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