Topic: mmcif Goto Github
Some thing interesting about mmcif
Some thing interesting about mmcif
mmcif,Extract chains' and polypeptides' sequences from PDB or mmCIF files.
User: amaurypm
mmcif,Open-source framework for simple and fast integration of protein structure data with sequence annotations and genetic variation
Organization: bartongroup
mmcif,Program to add sequences and data collection statistics to mmCIF files for PDB deposition
User: berrisfordjohn
mmcif,📦 A Command Line Tool for downloading protein structures, sequences and MSAs
User: biomadeira
mmcif,:wave: Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz
Organization: cusbg
Home Page: http://apoholo.cz
mmcif,A library to open/edit/save (crystallographic) Protein Data Bank (PDB) and mmCIF files in Rust.
User: douweschulte
Home Page: https://crates.io/crates/pdbtbx
mmcif,Encode information from a HADDOCK run to a cif file to be deposited in PDB-Dev.
Organization: haddocking
mmcif,📖 mmCIF support for hybrid/integrative models
Organization: ihmwg
Home Page: https://pdb-dev.wwpdb.org
mmcif,Benchmarking common tasks on proteins in various languages and packages
User: jgreener64
mmcif,Convert in batch CIF files to PDB
User: jmb-scripts
mmcif,Program to plot a Ramachandran plot of all dihedral angles from a given PDB file. Background is empirically generated from the peptides in the Top8000 PDB data set.
User: joseph-ellaway
mmcif,A small, developer-friendly 3D molecule viewer for the modern web
User: justinmc
Home Page: https://justinmc.github.io/tiny-molecule/
mmcif,Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
User: mooerslab
mmcif,Supports the use of PyMOL in literate programming in org-mode, which is best run in Emacs.
User: mooerslab
mmcif,Fixes mmCIF protein structure files
User: multimeric
mmcif,Library containing code to manipulate mmCIF and PDB files
Organization: pdb-redo
Home Page: https://pdb-redo.github.io/libcifpp/
mmcif,macromolecular crystallography library and utilities
Organization: project-gemmi
Home Page: https://project-gemmi.github.io/
mmcif,Benchmarks for reading and interpreting mmCIF files
Organization: project-gemmi
mmcif,Search PDB by elements.
Organization: project-gemmi
Home Page: https://project-gemmi.github.io/periodic-table/
mmcif,Parts of Gemmi in WebAssembly.
Organization: project-gemmi
mmcif,P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.
User: rdk
Home Page: https://rdk.github.io/p2rank/
mmcif,Protein Structure Archiver
Organization: refresh-bio
mmcif,Datatypes for the ribosome.
User: rtviii
Home Page: htpps://ribosome.xyz
mmcif,Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.
User: ruibin-liu
Home Page: https://moldf.readthedocs.io/en/latest/
mmcif,A PDBx/mmCIF-format parser and extractor.
User: samuellimce
mmcif,The pdbx-validation is a generation tool of alternative wwPDB validation reports
User: yokochi47
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