Topic: snp-genotyping Goto Github
Some thing interesting about snp-genotyping
Some thing interesting about snp-genotyping
snp-genotyping,A python script to remove duplicate snps from plink files and recode the resultant files into plink binaries free of duplicate snps
User: adiamb
snp-genotyping,Tools for analyzing raw DNA test data files. Shows Y chromosome and mitochondrial mtDNA haplogroups. LGPLv3 - use freely but share improvements.
User: alinja
snp-genotyping,Guide for the Baccarelli Lab GitHub
Organization: baccarellilab
snp-genotyping,Align against a reference genome and call variants
Organization: bccdc-phl
snp-genotyping,Bioinformatics Pipeline for dRADseq Data
User: eacooper400
snp-genotyping,Fast and simple haplotype counting.
User: gabrielkg
snp-genotyping,Ancestry inference with convolutional neural networks
Organization: gear-genomics
Home Page: https://www.gear-genomics.com/ancient/
snp-genotyping,Codes i wrote for the scientific paper "Predicting genotype environmental range from genomeโenvironment associations"
User: grelot
Home Page: https://onlinelibrary.wiley.com/doi/full/10.1111/mec.14723
snp-genotyping,This repo contains code that is relevant for the analysis (Mapping, BAM qc, Variant Calling, Filtering etc...) of IGSR data
Organization: igsr
Home Page: http://www.internationalgenome.org/
snp-genotyping,SNPware is a family of short bash scripts that allows to translate genotypes coded as GCTA or Illuimina Top Strand to AB coding using standard Illumina FinalReport files to create a library of genotype equivalences at each locus.
User: josuechinchilla
snp-genotyping,SNP pipeline using Snakemake for the Weisrock Lab's Tiger Salamander project.
User: kelly-sovacool
Home Page: https://doi.org/10.1073/pnas.2014719118
snp-genotyping,Population genetic analyses of seeded and wild populations of Texas bluebonnet (Lupinus texensis).
User: kgturner
snp-genotyping,SNP and variant calling pipeline for bacteria
User: lmc297
snp-genotyping,Genotype Calling with Uncertainty from Sequencing Data in Polyploids ๐๐๐ฅ๐ ๐ฅ
User: lvclark
snp-genotyping,Workflow to perform a Variant Calling Analysis
User: natmurad
snp-genotyping,SNP genotyping in polyploids
User: pblischak
Home Page: http://pblischak.github.io/polyploid-genotyping
snp-genotyping,Implementation of LAVA algorithm in Seq language.
User: ralemy
snp-genotyping,Wheat BRIL database created using FLASK server side, angularjs is heavily used at front end
User: ramesh8v
snp-genotyping,Advanced Computational Biology Project Assignment
User: richardbekoe
snp-genotyping,Variant calling + processing pipline using GATK based in Snakemake
User: samleenz
snp-genotyping,HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.
User: seppinho
Home Page: https://haplogrep.i-med.ac.at/
snp-genotyping,Custom scripts and workflows used in the genomics and population analysis of oat crown rust (Puccinia coronata f. sp. avenae) preprint (bioRxiv 2023.09.18.557855). All steps performed in Linux environment or R.
User: tc-hewitt
Home Page: https://doi.org/10.1101/2023.09.18.557855
snp-genotyping,GWAS third-level epistatic search tool for cluster architectures
Organization: udc-gac
snp-genotyping,DNA explorer - app for observing decrypted DNA-chains in digital format, app show information about single nucleotide polymorphisms, and provide a brief describtion - it may helps to determine if you have certain genetic predisposition to diseases, and show hidden information encoded in your DNA (your ancestries, phenotypes, predisposition to sport)
User: vvitali
snp-genotyping,SARS-CoV-2 early outbreak analysis. Two polymorphism sites 8517 and 27641 (CDS numbering) were found to genotype the early strains.
Organization: wuaipinglab
Home Page: https://www.biorxiv.org/content/10.1101/2020.02.29.971101v1
snp-genotyping,Convert mpileup format to base count tsv table
User: y9c
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