Topic: denovo-assembly Goto Github
Some thing interesting about denovo-assembly
Some thing interesting about denovo-assembly
denovo-assembly,String Graph Construction on Spark
Organization: atgenomix
denovo-assembly,:hibiscus: reference-free transcriptome assembly for short and long reads
Organization: bcgsc
denovo-assembly,Biocore's de novo transcriptome assembly workflow based on Nextflow
Organization: biocorecrg
denovo-assembly,A containerized nextflow pipeline designed to annotate prokaryote genomes.
User: chadfibke
denovo-assembly,Hifiasm: a haplotype-resolved assembler for accurate Hifi reads
User: chhylp123
denovo-assembly,CloudEC is a MapReduce-based algorithm for correcting errors in next-generation sequencing big data.
Organization: csclabtw
denovo-assembly,QReadSelector is a subset selection of high-depth next generation sequencing reads for de novo genome assembly using MapReduce framework.
Organization: csclabtw
denovo-assembly,Pipeline for de novo peptide sequencing (Novor, DeepNovo, SMSNet, PointNovo, Casanovo) and assembly with ALPS.
User: denisbeslic
denovo-assembly,Bioinformatics Pipeline for dRADseq Data
User: eacooper400
denovo-assembly,Iterative Organellar Genome Assembly
User: holmrenser
denovo-assembly,NextFlow pipeline for Virus Variant calling and de novo Assembly of Nanopore and Illumina Reads
User: joanmarticarreras
denovo-assembly,A WGS de novo assembler based on the FMD-index for large genomes
User: lh3
denovo-assembly,Standalone C library for assembling Illumina short reads in small regions
User: lh3
denovo-assembly,De novo assembly based variant calling pipeline for Illumina short reads
User: lh3
denovo-assembly,Ultrafast de novo assembly for long noisy reads (though having no consensus step)
User: lh3
denovo-assembly,Learning to untangle genome assembly with graph neural networks.
User: lvrcek
denovo-assembly,Python based implementation of De-Novo transcriptome assembly
User: mahendra-maiti
denovo-assembly,A comprehensive workflow for de novo assembly of whole-genome shotgun sequencing data using Velvet, followed by BLAST searches to analyze assembled contigs.
User: mansikath
denovo-assembly,Germline DNM caller based on LdBG assembly of pathogens
Organization: mcveanlab
denovo-assembly,
Organization: ncbi-hackathons
denovo-assembly,Simple bacterial assembly and annotation pipeline
Organization: nf-core
Home Page: https://nf-co.re/bacass
denovo-assembly,De novo assembly pipeline for 10X linked-reads using Supernova
Organization: nf-core
Home Page: https://nf-co.re/neutronstar
denovo-assembly,TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
Organization: palmuc
denovo-assembly,Calling SNPs using UNEAK (de novo) pipeline for ponderosa pine
User: shumengjun
denovo-assembly,Workflow Template
Organization: systempiper
denovo-assembly,Identification of transposon insertion sites
User: tchen-tt
denovo-assembly,A simple DSL2 workflow: tutorial
User: telatin
Home Page: https://telatin.github.io/microbiome-bioinformatics/Nextflow-start/
denovo-assembly,:floppy_disk: :page_with_curl: "Reads to report" for public health and clinical microbiology
User: tseemann
denovo-assembly,This is a compilation of my scripts for denovo-RNA-Seq assembly, annotation, and get count metrics for Differential gene expression analysis in Nesi hpc.
User: upendrabhattarai
denovo-assembly,Basic workflow for nanopore sequencing data
Organization: uphl-biongs
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