Topic: multiple-sequence-alignment Goto Github
Some thing interesting about multiple-sequence-alignment
Some thing interesting about multiple-sequence-alignment
multiple-sequence-alignment,Implementation of the NetMSA algorithm in Julia for multiple sequence alignment problem.
User: aadimator
multiple-sequence-alignment,🧬 Alinhamento Múltiplo de sequências feito em C, construído na matéria de Estrutura de Dados. 📚
User: abacaxiguy
multiple-sequence-alignment,Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.
User: althonos
multiple-sequence-alignment,Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.
User: althonos
multiple-sequence-alignment,Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!
User: althonos
Home Page: https://pytrimal.readthedocs.org
multiple-sequence-alignment,Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.
User: amaurypm
multiple-sequence-alignment,An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs
User: andreaguarracino
multiple-sequence-alignment,Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics
User: benhid
multiple-sequence-alignment,Differentiable Pairing using Alignment-based Language Models
Organization: bitbol-lab
Home Page: https://www.biorxiv.org/content/10.1101/2023.08.14.553209
multiple-sequence-alignment,A collection of phylogenetics tutorials delivered to colleagues at the Centre for Biological Control (CBC). Topics include producing Bayesian and Maximum Likelihood trees, haplotype networks, reading phylogenies into R, analysing ISSR and SSR data, and using STRUCTURE and SplitsTree.
User: clarkevansteenderen
multiple-sequence-alignment,A Julia package to analyze protein sequences, structures, and evolutionary information
User: diegozea
Home Page: https://diegozea.github.io/MIToS.jl/stable/
multiple-sequence-alignment,Improving long-read barcode-variant mapping using multiple sequence alignment.
Organization: dunhamlab
multiple-sequence-alignment,PFAM's micro service to assist to Mistic2.
User: ecolell
multiple-sequence-alignment,Exploring Evolution-aware & free protein language models as protein function predictors
User: elttaes
multiple-sequence-alignment,Implementation of Neural Distance Embeddings for Biological Sequences (NeuroSEED) in PyTorch (NeurIPS 2021)
User: gcorso
Home Page: https://arxiv.org/abs/2109.09740
multiple-sequence-alignment,A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0
Organization: inab
Home Page: https://trimal.readthedocs.io/
multiple-sequence-alignment,Graph based multi genome aligner
User: jasperlinthorst
multiple-sequence-alignment,Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learning
User: jaswindersingh2
Home Page: https://apisz.sparks-lab.org:8443/spot-rna2.html
multiple-sequence-alignment,Mugsy - multiple whole genome alignment tool
User: kloetzl
multiple-sequence-alignment,Cluster up to millions of peptide sequences on shared sequence motifs.
User: krejciadam
multiple-sequence-alignment,MSA2dist calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
User: kullrich
multiple-sequence-alignment,Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.
User: lkremer
multiple-sequence-alignment,a multiple sequence alignment tool
Organization: malabz
Home Page: http://lab.malab.cn/soft/halign/
multiple-sequence-alignment,do multiple nucleotide sequence alignment fast and accurately
Organization: malabz
Home Page: http://lab.malab.cn/soft/halign/
multiple-sequence-alignment,do multiple nucleotide sequence alignment fast and accurately
Organization: malabz
multiple-sequence-alignment,⚙️TPMA: a two pointers meta-alignment tool to ensemble different nucleic acid multiple sequence alignment results
Organization: malabz
multiple-sequence-alignment,Cultivate your multiple sequence alignments to get better trees
Organization: mdu-phl
multiple-sequence-alignment,Generation of protein sequences and evolutionary alignments via discrete diffusion models
Organization: microsoft
multiple-sequence-alignment,This is projects of Bioinformatics
User: mohammadtavakoli78
multiple-sequence-alignment,Scalable long read self-correction and assembly polishing with multiple sequence alignment
User: morispi
Home Page: https://doi.org/10.1038/s41598-020-80757-5
multiple-sequence-alignment,MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
User: moshi4
Home Page: https://moshi4.github.io/pyMSAviz
multiple-sequence-alignment,Analysis of the viral genomes of SARS-CoV2 using MAFFT and igtree
User: mountainman12
multiple-sequence-alignment,Python bindings to spoa
Organization: nanoporetech
Home Page: https://nanoporetech.com/
multiple-sequence-alignment,plot Multiple Sequence Alignment(MSA) of Clustal by python package
User: orangesi
Home Page: https://orangesi.github.io/pymsaploter/
multiple-sequence-alignment,Fast and accurate protein structure prediction
Organization: psipred
multiple-sequence-alignment,A tool for downloading HLA alleles, epitopes and frequencies
User: ramonamerong
multiple-sequence-alignment,Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
Organization: refresh-bio
multiple-sequence-alignment,Library-free horizontal transfer detection, with a focus on transposable element invasions
User: rpianezza
multiple-sequence-alignment,AncFlow: A snakemake based pipeline for the ancestral sequence reconstruction of clustered phylogenetic subtrees.
User: rrouz
multiple-sequence-alignment,Enhancements to Biopython for working with biological data
User: samberry19
multiple-sequence-alignment,Multiple sequence alignment visualizer
Organization: sanderlab
Home Page: http://alignmentviewer.org
multiple-sequence-alignment,Making Protein folding accessible to all!
User: sokrypton
multiple-sequence-alignment,🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations
Organization: thekaplanlab
Home Page: https://thekaplanlab.github.io
multiple-sequence-alignment,Talleres Internacionales de Bioinformática - Centro de Ciencias Genómicas, UNAM, Cuernavaca, México
User: vinuesa
multiple-sequence-alignment,abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
Organization: xinglab
Home Page: https://github.com/yangao07/abPOA
multiple-sequence-alignment,TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
Organization: xinglab
Home Page: https://github.com/yangao07/TideHunter
multiple-sequence-alignment,abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
User: yangao07
multiple-sequence-alignment,TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
User: yangao07
multiple-sequence-alignment,Several small Bioinformatics projects implementing related algorithms, including Semi-Global alignment, Multiple Sequence Alignment using Star-Alignment, and MSA using PSSM profiles considering Gaps.
User: zahrasalarian
multiple-sequence-alignment,
User: zamirmehdi
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