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animelogos

Some anime logos I remade myself in vector graphics

annotate.snakefile

A Snakemake pipeline to copy annotations between GenBank files

blanket

A simple Rust macro to derive blanket implementations for your traits.

botrytis

A minimal webapp to display Botrytis cinerea sequencing data using CherryPy, Jinja2 and Bootstrap

cksfv.rs

A 10x faster drop-in reimplementation of cksfv using Rust and the crc32fast crate.

config.fish

My own configuration files for the fish shell

elabackup

Quick and dirty CLI app to backup an eLabFTW instance using the HTTP API

embedded-picofont

The PICO-8 font to use with embedded-graphics.

ffpb

A progress bar for ffmpeg. Yay !

flips.rs

Rust bindings to Flips, the Floating IPS patcher.

fs.archive

Pyfilesystem2 for various archive filesystems

fs.expose

fs.smbfs

Pyfilesystem2 over SMB using pysmb

fs.sshfs

Pyfilesystem2 over SSH using paramiko

gb-io.py

A Python interface to gb-io, a fast GenBank parser written in Rust.

gccontent-benchmark

Benchmarking different languages for a simple bioinformatics task (Counting the GC fraction of DNA in a FASTA file)

horned-owl

iao

information artifact ontology

instalooter

Another API-less Instagram pictures and videos downloader.

iocursor

A zero-copy file-like wrapper for Python byte buffers, inspired by Rust's std::io::Cursor.

jinja2-fsloader

A Jinja2 template loader using PyFilesystem2.

kmachine

A toy compiler that produces Kappa code from Counter Machine instructions.

kodama

Fast hierarchical agglomerative clustering in Rust.

lapucelle-textures

A PPSSPP texture pack for La Pucelle Ragnarok (english patched)

lightmotif

A lightweight platform-accelerated library for biological motif scanning using position weight matrices.

lua-fix16

An experimental patch with fixed-point arithmetic support for Lua 5.3

mini3di

A NumPy port of the foldseek code for encoding protein structures to 3di.

moclo

Modular cloning simulation with the MoClo framework in Python

muscle

Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.

nafcodec

Rust coder/decoder for Nucleotide Archival Format (NAF) files.