Topic: phenotyping Goto Github
Some thing interesting about phenotyping
Some thing interesting about phenotyping
phenotyping,Code accompanying our CIKM paper: "copa: constrained parafac2 for sparse & large datasets"
User: aafshar
Home Page: http://www.prism.gatech.edu/~aafshar8/
phenotyping,Code accompanying our ACM CHIL paper: "TASTE: Temporal and Static Tensor Factorization for Phenotyping Electronic Health Records"
User: aafshar
Home Page: http://www.prism.gatech.edu/~aafshar8/
phenotyping,This repository serves as a valuable resource for individuals engaged in data exploration, statistical analysis, and research within the domains of plant breeding, genetics, statistics, and genomics. The purpose of this repository is to share a collection of R codes that can be utilized by others for their own data analysis projects
User: benjaminnarhmadey
phenotyping,Translational Computational Phenotyping
User: callahantiff
phenotyping,Web application for managing experimental and environmental metadata for plant experiments
Organization: cbib
phenotyping,Implementation of the 3D reconstruction pipeline optimized for plant branching structures.
Organization: computational-plant-science
Home Page: https://www.youtube.com/watch?v=PNoPcFrXhVY
phenotyping,Computation of root phenes from 3D point clouds.
Organization: computational-plant-science
phenotyping,Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.
Organization: computational-plant-science
Home Page: https://www.dirt.cyverse.org
phenotyping,
Organization: computational-plant-science
Home Page: https://plantit.cyverse.org
phenotyping,Information and scripts for the CropAndWeed Dataset
Organization: cropandweed
phenotyping,GridScore is a field phenotyping app for trials data.
Organization: cropgeeks
Home Page: https://ics.hutton.ac.uk/gridscore
phenotyping,Leaf disc scoring pipeline for estimating the area of infection on leaf discs from inoculation experiments.
User: daniel-ze
phenotyping,Code to generate ontology annotated objects (e.g. HPO annotated patients)
User: drseb
phenotyping,Bayesian ontology querying from Bauer et al.
User: drseb
Home Page: https://phenomics.github.io/software-boqa.html
phenotyping,HPO archive of the ontology and annotations
User: drseb
phenotyping,Internationalisation of the HPO content
User: drseb
Home Page: https://crowdin.com/project/hpo-translation
phenotyping,Project to generate phenotype opposite_of relationships and investigate the effect on ontology-based algorithms
User: drseb
phenotyping,Sentinel-2 Crop Trait Retrieval Using Physiological and Phenological Priors from Field Phenotyping (Graf et al., 2023, RSE)
Organization: eoa-team
phenotyping,R package for finding patients in SQL databases using formulas and without using SQL joins
User: fabkury
Home Page: https://fabkury.github.io/phea
phenotyping,Video recording and image analysis of fishes to automate and increase the efficiency of fish phenotyping, and bolster posterior analysis to improve farm production and management.
Organization: fishguardians
phenotyping,deep prototype learning for EHR data
User: futianfan
Home Page: https://futianfan.github.io/BCB19_PEARL.pdf
phenotyping,knowledge graph based phenotyping
User: honghan
phenotyping,an R package for predicting plant biomass accumulation based on image-derived parameters
User: htpmod
phenotyping,Software program for generating synthetic datasets for genotypes and phenotypes
Organization: intervene-eu-h2020
phenotyping,Self-Supervised Vision Transformers for multiplexed imaging datasets
User: jacobhanimann
phenotyping,Standardise and share computable disease definitions
Organization: kclhi
Home Page: https://kclhi.org/phenoflow
phenotyping,Batch process FLIR radiometric (thermal) JPEGs and generate clean lossless images with consistent scale and palette
User: kentavv
phenotyping,PyTorch library for MIMIC III Benchmark experiments
User: kingrc15
Home Page: https://torchmimic.readthedocs.io/en/latest/
phenotyping,An R shiny app for digital image phenotyping in small fruits
User: mchizk1
phenotyping,Standard terms for annotating mammalian phenotypic data
Organization: mgijax
phenotyping,Minimum Information About a Plant Phenotyping Experiment
Organization: miappe
Home Page: https://www.miappe.org
phenotyping,HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇
User: mmasoud1
Home Page: https://mmasoud1.github.io/HistoJS/
phenotyping,developing a portable NLP-based phenotyping system
User: mocherson
phenotyping,Ontology for the description of human clinical features
Organization: obophenotype
Home Page: http://obophenotype.github.io/human-phenotype-ontology/
phenotyping,:fish: Zebrafish Phenotype Ontology: Build Tools (OBSOLETE)
Organization: obophenotype
phenotyping,Rhizoscan
Organization: openalea-incubator
phenotyping,An imaging library to detect and track future position of ears on maize plants
Organization: openalea
phenotyping,Phenotyping Maize over time
Organization: openalea
phenotyping,Web-interface to the Biofuel Ecophysiological Traits and Yields Database (used by PEcAn and TERRA REF)
Organization: pecanproject
Home Page: https://www.betydb.org
phenotyping,Website for the Phenomics and Machine Learning Team
Organization: phenomics
Home Page: https://phenomics.github.io/
phenotyping,A phenotyping pipeline for Python
Organization: phenopype
Home Page: https://www.phenopype.org
phenotyping,Modular, Scalable Phenomic Data Processing Pipelines
Organization: phytooracle
phenotyping,Tools for phenotyping and modeling with the Heliaphen sunflower phenotyping platform.
User: picasa
phenotyping,Plant Phenotyping APP
User: robail-yasrab
phenotyping,RootNav Viewer 2.0: A visualization tool for Root System Architecture (RSA) using RSML.
User: robail-yasrab
phenotyping,
User: robail-yasrab
phenotyping,Exploratory Research -- Clustering Similar Patients by Phenotype
User: ryan-laird
phenotyping,Scanomatic
Organization: scan-o-matic
phenotyping,3-Demeter Capture is a tool for building 3-D point clouds from images
User: thsant
phenotyping,PhenoSV: Interpretable phenotype-aware model for the prioritization of genes affected by structural variants.
Organization: wglab
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