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afni

Official AFNI source and documentation

algorithms

Code repository associated with Learning Algorithms: A Programmer's Guide to Writing Better Code. https://oreil.ly/learn-algorithms

andysbrainbook

This repository contains the files that generate Andy's Brain Book on ReadTheDocs.

applied-computational-genomics

Applied Computational Genomics Course at UU: Spring 2020

awesome-browser-data-science-libraries

A curated list of awesome data science libraries that can run in a browser

awesome-causality-algorithms

An index of algorithms for learning causality with data

awesome-multi-omics

List of software packages for multi-omics analysis

awesome-segmentation-with-transformer

Transformer-Based Visual Segmentation: A Survey

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bc-2.2-test

This is experimental space for bc 2.2.0

bctest

This is experimental space - NOT for public use

bioformats2raw

Bio-Formats image file format to raw format converter

cancer-proteomics-compendium-n2002

We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies

causal_salad_2021

One day course on causal inference, MPI-EVA 9 September 2021

code-and-learn

Organizing the Code&Learn session for Node+JS Interactive

computational-neuroscience

Using computational tools to explore the networks underlying cognitive neuroscience

course-content

NMA Computational Neuroscience

cs6208_2023

Advanced Topics in Artificial Intelligence, NUS CS6208, 2023

danfojs

Danfo.js is an open source, JavaScript library providing high performance, intuitive, and easy to use data structures for manipulating and processing structured data.

diffusers.js

diffusers implementation for node.js and browser

digital_slide_archive

The official deployment of the Digital Slide Archive and HistomicsTK.

dsa_reg

eccb2022_sc_funcomics

Functional analysis of single-cell transcriptomics

fuse-med-ml

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

generative_deep_learning_2nd_edition

The official code repository for the second edition of the O'Reilly book Generative Deep Learning: Teaching Machines to Paint, Write, Compose and Play.

gifti-reader-js

A JavaScript GIFTI file format reader.

histojs

HistoJS: Web-Based Analytical Tool for Multiplexed Images. Limited Github Online Demo 👇

imagej.js

ImageJS--Image analysis in the browser with ImageJ

medium_notebook

Repository containing notebooks of my posts on Medium

neu502b-lab