obophenotype Goto Github PK

aba_uberon

Ontologized versions of the ABA structureGraphs - with mappings to Uberon

allen-neuron-types

Building an ontology of specialised neuron types from data - well supported terms may later migrate to CL.

ascomycete-phenotype-ontology

asct-b_validation

asctb-tables

LinkML schema for ASCB-T tables

bds-pipeline-config

Brain data standards ontologies building pipeline configuration

bio-attribute-ontology

source files for OBA (Ontology of Biological Attributes)

biological-spatial-ontology

An ontology for respresenting spatial concepts, anatomical axes, gradients, regions, planes, sides, and surfaces

brain_data_standards_ontologies

A repository for co-ordinating work on ontologies for the Brain Data Standards Project

brain_data_standards_queries

A repository for the Brain Data Standards Ontology cypher queries.

c-elegans-development-ontology

C. elegans Development Ontology

c-elegans-gross-anatomy-ontology

C. elegans Gross Anatomy Ontology

c-elegans-phenotype-ontology

Ontology for phenotypes pertaining to the nematode Caenorhabditis elegans and related nematodes used by the nematode genome database WormBase

caro

Working repository for v2 of CARO

ccf_graphs

ccn2

Developing a successor to the CCN taxonomy system

cell-ontology

An ontology of cell types

cell-ontology-training

Training session for the Cell Ontology

cephalopod-ontology

An ontology of cephalopod anatomy and traits

chebi_obo_slim

A slimmed down version of CHEBI sufficient to cover 99% of the term needs across OBO ontologies

chiro

CHEBI Integrated Role Ontology

cl.github.io

covid-kg-ontology-preprocessing

Configuration for the preprocessing of ontology dependencies for the ingestion into a knowledge graph.

covid19cellatlas_semantic_map

A mapping of cell annotations in datasets on https://www.covid19cellatlas.org/ to CL using matrix_semantic_map

ctenophore-ontology

An ontology of ctenophores (comb jellies)

developmental-stage-ontologies

Source files for various species-specific stage ontologies

dicty-phenotype-ontology

Dicty Phenotype Ontology

expression_patterns

A repository of design patterns for semantic models of gene expression

fungal-anatomy-ontology

A structured controlled vocabulary for the anatomy of fungi

hpo-translations

This repo will contain the Human Phenotype Ontology language profiles