Topic: crispr-analysis Goto Github
Some thing interesting about crispr-analysis
Some thing interesting about crispr-analysis
crispr-analysis,MinTEs is a computational framework that aims at finding optimised reference templates given user-specified parameters (i.e. CRISPR-Cas9 library, reference gene templates, percentage of subsampling).
User: alevin1995
crispr-analysis,Flexible analysis of high-content CRISPR screening
Organization: arcinstitute
Home Page: https://screenpro2.rtfd.io
crispr-analysis,A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data
Organization: bimsbbioinfo
crispr-analysis,BioGRID C-UP (CRISPR Upload) LIMS System
Organization: biogrid
Home Page: https://thebiogrid.org
crispr-analysis,CRISPR, faster, better – The Crackling method for whole-genome target detection
Organization: bmds-lab
crispr-analysis,Search guide-RNA sequences given a genome or gene sequence
User: bretonics
crispr-analysis,Bowtie-based alignment of CRISPR gRNA spacer sequences
Organization: crisprverse
crispr-analysis,BWA-based alignment of CRISPR gRNA spacer sequences
Organization: crisprverse
crispr-analysis,Useful human and mouse data for the crisprVerse ecosystem
Organization: crisprverse
crispr-analysis,Pre-trained models for the crisprScore package
Organization: crisprverse
crispr-analysis,Shiny interface for CRISPR gRNAs designed with the crisprVerse
Organization: crisprverse
crispr-analysis,Collection of R packages that work in harmony for CRISPR gRNA design
Organization: crisprverse
crispr-analysis,Visualization of CRISPR guide RNAs (gRNAs)
Organization: crisprverse
crispr-analysis,Tutorials for the crisprVerse
Organization: crisprverse
crispr-analysis,List of software/websites/databases/other stuff for genome engineering
User: davidliwei
crispr-analysis,Daniel Adediran
User: dexwel
crispr-analysis,UNDER CONSTRUCTION: CRISPR sgRNA quantification pipeline
User: drpatelh
Home Page: http://nf-co.re
crispr-analysis,Data analysis scripts for Datlinger et. al, 2017 (doi:10.1038/nmeth.4177)
Organization: epigen
Home Page: https://crop-seq.computational-epigenetics.org
crispr-analysis,Analysis package for processing counts from genome-wide CRISPR/Cas9 screens
User: felicityallen
crispr-analysis,A cross-platform Graphical Analysis Tool for high-throughput CRISPR-based genome editing evaluation
User: fuhuancheng
crispr-analysis,Bioinformatics pipeline to analyze CRISPR synthetic lethal and synthetic viable screens
Organization: gaorav-gupta-lab
crispr-analysis,Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products
Organization: gear-genomics
Home Page: https://www.gear-genomics.com/indigo/
crispr-analysis,Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files
Organization: gear-genomics
Home Page: https://www.gear-genomics.com/
crispr-analysis,[This is an archived repository, see the current version in Arc Institute GitHub]
Organization: gilbertlabucsf
Home Page: https://github.com/ArcInstitute/ScreenPro2
crispr-analysis,Identify and annotate mutations from genome editing assays.
User: hlcas
crispr-analysis,CB2-Experiments is the repository of scripts and data of experiments were performed to benchmark the performance of CB2.
User: hyunhwan-jeong
crispr-analysis,InDels analysis of CRISPR lines by NGS amplicon sequencing technology for a multicopy gene family.
User: labfbarro
crispr-analysis,Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data
User: lucapinello
crispr-analysis,Anaylsis for 3D CRISPR screens. Rust core with Python wrapping.
User: luk13mad
crispr-analysis,Analysis of CRISPR libraries
User: martinezvbs
crispr-analysis,ProTiler method for the analysis and visualization of CRISPR screens with tiling-sgRNA design
User: mdhewei
Home Page: https://github.com/MDhewei/ProTiler-1.0.0
crispr-analysis,CRISPR + CCLE heat map
User: naikai
crispr-analysis,A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted next generation sequencing (NGS) data (`targeted`) as well as the discovery of important genes from knock-out or activation CRISPR-Cas9 screens using CRISPR pooled DNA (`screening`).
Organization: nf-core
Home Page: https://nf-co.re/crisprseq
crispr-analysis,CRISPR-Cas9 Excision Therapy Suitability
User: parthspatel
Home Page: https://parthspatel.me/senior-design/
crispr-analysis,Small RNA-Seq analysis for Yan J., Ravisankar P., Zhao A., Li H., Oyler-Castrillo P., Solley S., Chan M., Parsons L., Adamson B. (2023). An endogenous small RNA-binding protein safeguards prime editing. Manuscript submitted for publication.
Organization: princeton-lsi-researchcomputing
crispr-analysis,CRISPRSeqSim is a tool that simulates results of CRISPR/cas editing fragments target sequencing.
Organization: quantori
crispr-analysis,TP final de la materia 7550 - Introduccion a los sistemas inteligentes
User: rozanecm
crispr-analysis,CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
User: russel88
Home Page: https://typer.crispr.dk
crispr-analysis,Synthego ICE - Inference of CRISPR Editing software
Organization: synthego-open
crispr-analysis,A program used to find indels on target gene edited by CRISPR/Cas9
User: tuanjienew
crispr-analysis,Research associated to CRISPR-Cas. Completed under Dr. Manuel Lladser at CU boulder
User: wilderlavington
crispr-analysis,Analysis codes for high-throughput short read sequencing data. Especially for RCP-PCR experiments on clonal CRISPR KO samples.
Organization: yachielab
crispr-analysis,Pre-processing of multiplexed CRISPR / shRNA Screens (deprecated)
Organization: zuberlab
crispr-analysis,Statistical Analysis of multiplexed CRISPR / shRNA Screens using MAGeCK (deprecated)
Organization: zuberlab
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