Topic: arabidopsis Goto Github
Some thing interesting about arabidopsis
Some thing interesting about arabidopsis
arabidopsis,π±π§¬ Collection of scripts for the paper: π "Characterization of Arabidopsis thaliana Promoter Bidirectionality and Antisense RNAs by Inactivation of Nuclear RNA Decay Pathways" (The Plant Cell 2020; PMID 32213639 π)
User: athieffry
arabidopsis,π±π§¬ Collection of scripts for the paper: "PAMP-triggered genetic reprogramming involves widespread alternative transcription initiation and an immediate transcription factor wave" (The Plant Cell 2022; PMID 35404429 π)
User: athieffry
arabidopsis, An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictographic" (eFP) based on its RPKM expression level.
Organization: bioanalyticresource
Home Page: https://bar.utoronto.ca/eFP-Seq_Browser/
arabidopsis,A data visualization tool to display tissue expression data for Arabidopsis thaliana
Organization: bioanalyticresource
Home Page: https://bar.utoronto.ca/
arabidopsis,Python scripts related to the At7 sequencing project
User: bpucker
arabidopsis,easing your access to arabidopsis tair
User: gauravcodepro
arabidopsis,arabidopsis-maf-cap-accessions. genome extraction, alignments, visualization, phylogenomics, ancestral tree
User: gauravcodepro
Home Page: https://gauravcodepro.github.io/arabidopsis-maf-cap-accessions/
arabidopsis,a streamlit application to interact with arabidopsis plant obo for graphviz and other functions
User: gauravcodepro
Home Page: https://app-arabidopsis-ontology-graphs.streamlit.app/
arabidopsis,tairaccession python package for interaction with tair and analyzing arabidopsis genome.
User: gauravcodepro
Home Page: https://gauravcodepro.github.io/tairaccession/
arabidopsis,A simple python library to identify the most likely strain from the population
Organization: gregor-mendel-institute
Home Page: https://arageno.gmi.oeaw.ac.at/
arabidopsis,Clustering of 1,135 Arabidopsis thaliana genomes from 1001 Genomes Project (https://1001genomes.org/)
User: hagax8
Home Page: https://lovingscience.com/ancestries/arabidopsis
arabidopsis,A pipeline to analyse small RNA expression using Illumina sequencing data
User: ingefast
arabidopsis,SPIRO is a Smart Plate Imaging Robot
User: jonasoh
Home Page: https://www.alyonaminina.org/spiro
arabidopsis,Genomic prediction of amino acid traits in Arabidopsis seeds
User: mishaploid
arabidopsis,Nextflow pipeline to assemble genomes from nanopore reads.
User: nschan
arabidopsis,Nextflow pipeline for SNPmatch (https://github.com/Gregor-Mendel-Institute/SNPmatch.git)
User: rbpisupati
arabidopsis,Analysis of transcriptomic dataset of A. thaliana Multi Protein Bridging Factor 1c knockout
User: renee-napoliello
arabidopsis,Anlysis of small RNAs in Arabidopsis SWR1 mutant (published in Choi et al. 2016, Plant Physiology, http://www.plantphysiol.org/content/171/2/1128)
User: seb-mueller
arabidopsis,Gene ID Retrieval from TAIR: R code to retrieve gene IDs from TAIR (The Arabidopsis Information Resource) and export them as CSV files
User: sivkri
arabidopsis,Arabidopsis EcoGEx (R-π¦ + πΈοΈ-App)
User: sk-sahu
Home Page: https://sangram.shinyapps.io/EcoGEx
arabidopsis,A website to explore biological relationships between Arabidopsis thailiana genetic characteristics.
User: sweekwang
Home Page: https://sweekwang.github.io/golabel/
arabidopsis,Interactive Functional Annotations Dashboard
Organization: tair
Home Page: http://ec2-3-15-183-113.us-east-2.compute.amazonaws.com/app/#/snapshot/genes
arabidopsis,An automated pipeline for analyzing arabidopsis luciferase imaging data
User: tomas-p
arabidopsis,HiFi-SR is a Python-based pipeline for the detection of plant mitochondrial structural rearrangements based on the mapping of PacBio high-fidelity (HiFi) reads or Circular Consensus Sequencing (ccs) data, to a reference genome (i.e., the hypothetical master cycle DNA).
User: zouyinstein
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