Comments (2)
cgao90
commented on July 21, 2024
Hi Lucy,
mergeH5 was designed for merging those HDF5 files containing sparse data matrices, for example, the Feature-Barcode Matrix from 10x (https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/advanced/h5_matrices?src=website&lss=organic/direct/direct&cnm=wbr-2020-08-21-event-ra_g-p_scmage-apac-2020-08-21-event-ra_g-p_scmage-apac&cid=7011P000000oWJZ). So I'm afraid it is not able to merge those sample_molecule_info.h5 files that have different content and HDF5 file hierarchy.
Best,
Chao
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lucygarner
commented on July 21, 2024
Ok thank you, I have got this working with the sample_filtered_feature_bc_matrix.h5 files now.
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