Comments (2)
Hello! Did you happen to try and install liger via CRAN with install.packages
? Unfortunately there is another package called liger (and it's the one currently available through CRAN), and it doesn't have our functionality. If this is the case, you'll need to remove your current installation of liger and install our package with devtools::install_github('MacoskoLab/liger')
.
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Ah I see, that solved the issue. Thanks.
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Related Issues (20)
- Generate gene and promoter bed files
- Problems with scaleNotCenter() HOT 2
- Prepare for upcoming Seurat v5 release HOT 1
- Bug in Seurat's wrapper function HOT 1
- cran package archived HOT 6
- NaNs during `SelectGenes()` HOT 1
- Error on makeFeatureMatrix HOT 1
- How to improving similarity between snRNA-seq and snATAC-seq nuclei, by tuning parameters like 'k', 'lambda'? HOT 4
- Dataset specificity plot
- Issue with loading old liger object via convertOldLiger function HOT 3
- Error in `signal_stage()` HOT 4
- invalid type "list" in R_matrix_as_sparse error HOT 3
- no slot name "defaultCluster" for this object of class "liger" HOT 1
- Query on building shared factor neighborhood graph HOT 2
- Error when performing the Wilcoxon test on the peak counts HOT 1
- Error in ImputeKNN
- How can I determine the similarity scores between clusters using Liger's UINMF? HOT 5
- I cannot find joint cluster result in liger object HOT 2
- Error When Using `createLiger` with HDF5 File HOT 2
- Loading a dataset generated with 'liger' using 'rliger' HOT 3
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