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dockerfiles ๐Ÿณ

A collection of dockerfiles to enable reproducible scientific research and beyond!

Overview

This repository contains dockerfiles for commonly used bioinformatics tools and applications. Each child directory represents a dockerized tool. If multiple versions of a tool exist, there maybe a sub-directory for each version of the tool.

Within any given tool's directory, you will find a REAME.md and a Dockerfile. Each README.md contains instructions for how to build, tag, and push an image to Dockerhub. Please note that each Docker image also contains a copy of its Dockerfile in /opt2/Dockerfile.

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes.

Prerequisites

What things you need to install:

Accounts you need:

Installation

Once the prerequisites have been met, setting up a development environment is easy!

Let's start off by cloning this repository:

git clone https://github.com/OpenOmics/dockerfiles.git
cd dockerfiles/

Versioning

We use git, GitHub, and DockerHub for versioning. For the versions available on GitHub, please see the tags on this repository. For more information about available container images, please visit Dockerhub.


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