mmesbahu / gwas-pw-paper Goto Github PK

Data/code for Pickrell et al. "Detection and interpretation of shared genetic influences on 40 human traits".

For GWAS that are not publicly available (platelet count/volume and the 23andMe studies) only a limited amount of data is available here.

Folders are:

23andMe_docs/

Documents from 23andMe describing their GWAS

MRMR/

Data and code to reproduce the "more robust Mendelian randomization" analyses

all_single/

Lead SNPs from all regions in Table 1

fig_code/

Code to reproduce the figures

gwas-pw-runs/

Output from all gwas-pw runs

overlaps/

Summary statistics for pairs of GWAS

sims/

Code to run simulations

tex/

TeX code