Docker runs example and quits about linearham HOT 5 CLOSED

We should probably have some instructions in the README on how to run with Docker.

The implicit command is to run the linearham test command and then clean up

To run anything else, you just need to specify a command after quay.io/matsengrp/linearham, e.g. /bin/bash as Duncan said:

docker run -it -v /home/schrammca/2016201_Rv217/20170427/:/data quay.io/matsengrp/linearham /bin/bash

from linearham.

You should add /bin/bash to the command -- look in the partis install docs for some details

from linearham.

Awesome, thanks

from linearham.

Hi all! As someone who has never used docker before trying to run your image, it would have saved me a few hours if I had known to add bash after (didn't think to look in closed issues for this...) 👍

from linearham.

Hi @nannabarnkob sorry about that! But thanks for adding the feedback, we really appreciate it, and we'll use it to update the docs.

from linearham.