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mscoreutils

Core Utils for Mass Spectrometry Data

msexperiment

Managing and Processing Mass Spectrometry Experiments

msgui

Mass spectrometry data browser

msidmatching

Sandbox for matching ids between raw and identification data

msmbstyle

msnbase

Base Classes and Functions for Mass Spectrometry and Proteomics

msnbaseboxcar

Prototype to process boxcar data

msnid

utilities for handling MS/MS proteomic identifications

mspack

C++ lossless and lossy mass spectrometry compression

msproteomicstools

Some hopefully useful tools for mass spectrometry applied to proteomics

msqrob

Robust statistical inference for quantitative LC-MS proteomics

msqrob2

Implementation of the MSqRob analysis of differentially expressed proteins using the Features infrastructure

mstut

A tutorial to learn basics of mass spectrometry in R.

my-r-packages

A summary of my R packages

myp

A package developed as part of the CSAMA 2018 workshop.

mzr

Playground area for the mzR package. The main code repository is now at https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mzR/

n14n15

N14/N15 ratio quantitation

nano-emacs

GNU Emacs / N Λ N O - Emacs made simple

network-norm-exple

oliviaguest.github.io

My personal website

omadb

open-rr-bioinfo-best-practice

Best practices in bioinformatics research: open source software and reproducibility

open-scholarship-curriculum

An open scholarship curriculum

openrefine-ecology

Lesson on OpenRefine for ecology

opentsne

Extensible, parallel implementations of t-SNE

org-mode-r-tutorial

A tutorial for using the R language within org-mode

pancakes

My pancakes recipe

paths-filter

Conditionally run actions based on files modified by PR, feature branch or pushed commits

pbase

Manipluating and exploring protein and proteomics data

pda

pda - Proteomics Data Analysis