This package describes a simple prototype to process
BoxCar data using
the MSnbase
package. Is is meant
as an illustration of how to use MSnbase
to prototype and develop
computational mass spectrometry methods and not to replace the
reference MaxQuant
implementation.
To install the package and its dependencies:
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MSnbase")
BiocManager::install("lgatto/MSnbaseBoxCar")