Comments (2)
Please fill in the issue template in full and provide a reproducible example.
from complex-upset.
{
library(ggplot2)
library(ComplexUpset)
}
set_size(8, 3)
upset(
M1_BinaryMatrix,
colnames(M1_BinaryMatrix),
min_degree = 2,
base_annotations = list(
'Intersection ratio'=intersection_ratio(text_mapping=aes(label=!!upset_text_percentage()))
+ ylab("")
+ theme(axis.text.y=element_blank())
),
sort_intersections_by='ratio',
name = "",
annotations = list(),
themes = upset_themes,
stripes=c(alpha('grey90', 0.45), alpha('white', 0.3)),
labeller = identity,
height_ratio = 0.5,
width_ratio = 0.3,
sort_sets='ascending',
wrap = FALSE,
set_sizes=(
upset_set_size(position='right')
+ geom_text(aes(label=!!aes_percentage(relative_to='all')), hjust=1.1, stat='count', color='white')
+ ylab("")
+ theme(axis.text.x = element_blank())
),
mode = "distinct",
queries = list(),
guides = NULL,
encode_sets = TRUE,
matrix = intersection_matrix(
geom=geom_point(
shape='square',
size=4
),
segment=geom_segment(
linetype='solid'
),
outline_color=list(
active='darkorange3',
inactive='grey70'
)
),
n_intersections='all'
) +
labs(title = "",
caption = "")
from complex-upset.
Related Issues (20)
- Incorrect intersection size HOT 8
- Memory issue when passing "intersection=" parameter to large matrix HOT 1
- Add more examples
- add intersection of the union of certain sets within the same intersection upset plot. HOT 2
- Set default color of dots in the matrix plot HOT 1
- Ordering by intersection sizes and degree HOT 1
- y axis units for the intersection size and stacking plots HOT 7
- Adjusting “Intersection size” to display the percentage of each group when the bars are filled
- Issue with fill colours for set sizes HOT 3
- Changing the y-axis scale for intersection_size from ComplexUpset package HOT 1
- Mapping categorical values to dots in intersection matrix HOT 1
- Deviation
- Possible built-time bug in `upset_themes`
- Coloring multiple *specific* insections HOT 2
- API seems broken after the latest updates in ggplot2 (>= 3.5.0) HOT 28
- Error "The `axis.text.theta` theme element is not defined in the element hierarchy." HOT 2
- How to color points by variable not in the dataset
- Setting order of intersections with a long list
- Define one or two groups to be compared to all other groups HOT 1
- Error in plot_them(plot)! HOT 3
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from complex-upset.