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spring

FASTQ compression

sqlite3-to-mysql

Make an Sqlite3 export MySQL readable.

squid

ssgsea2.0

Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

star

RNA-seq aligner

star-fusion

STAR-Fusion codebase

statrethinking_winter2019

Statistical Rethinking course at MPI-EVA from Dec 2018 through Feb 2019

stinger

Across the Great Wall, we can reach every corner in the world.

strawberry

A program for fast and accurate genome-guided transcripts reconstruction and quantification from paired-end RNA-seq

stringtie

Transcript assembly and quantification for RNA-Seq

subpixel

subpixel: A subpixel convnet for super resolution with Tensorflow

superfreq

Analysis pipeline for cancer exomes

swirl

:cyclone: Learn R, in R.

switchyomega

Manage and switch between multiple proxies quickly & easily.

systempiper

NGS workflow environment

taco

Multi-sample transcriptome assembly from RNA-Seq

taiji

All-in-one analysis pipeline

tcag-wgs-cnv-workflow

Scripts involved in our workflow for detecting CNVs from WGS data using read depth-based methods

tcgamutations

R data package for pre-compiled somatic mutations from TCGA cohorts (from Broad Firehose and TCGA MC3 Project)

telseq

A software for calculating telomere length

the-book-of-secret-knowledge

:dizzy: A collection of awesome lists, manuals, blogs, hacks, one-liners, cli/web tools and more. Especially for System and Network Administrators, DevOps, Pentesters or Security Researchers.

third-edition

Code and graphics for the projects in the 3rd edition of Head First C# (2013)

tidyexplain

Animations of tidyverse verbs using R, the tidyverse, and gganimate

tldr

fast and interactive tldr client written with go

tracer

TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data

ugene

UGENE is free open-source cross-platform bioinformatics software

user2017-data.table-tutorial

Materials used for data.table tutorial at useR2017 Brussels including exercises and answers

v2ray

最好用的 V2Ray 一键安装脚本 & 管理脚本

v2ray-core

A platform for building proxies to bypass network restrictions.

vawk

An awk-like VCF parser