Usage questions should be posted in the plink2-users Google group (https://groups.google.com/g/plink2-users ).
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A comprehensive update to the PLINK association analysis toolset. Beta testing of the first new version (1.90), focused on speed and memory efficiency improvements, is finishing up. Development is now focused on building out support for multiallelic, phased, and dosage data in PLINK 2.0.
Home Page: https://www.cog-genomics.org/plink/2.0/