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feigeliudan01's Projects

m-combat icon m-combat

Novel modification to ComBat by Johson, Rabinovic, and Li (Biostatistics, 2007) to shift data to mean and variance of subset of samples rather than grand mean and pooled variance (http://www.biomedcentral.com/1471-2105/16/63). Authored by Caleb K. Stein in 2014.

magrittr icon magrittr

Improve the readability of R code with the pipe

make-activity icon make-activity

Walks through the hands-on activity showing how to automate a data analytical pipeline with make

mapggm_supplemental icon mapggm_supplemental

Simulation pipeline and TCGA data/scripts for "Detection of multiple perturbations in multi-omics biological networks''

md-scripts icon md-scripts

A collections of scripts for working molecular dynamics simulations

md_ljp icon md_ljp

An elementary MD simulation program written in python

mds-expression icon mds-expression

R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes

meta4diag icon meta4diag

:exclamation: This is a read-only mirror of the CRAN R package repository. meta4diag — Meta-Analysis for Diagnostic Test Studies

metabox icon metabox

a toolbox for metabolomic data analysis, visualization and ‘omic’ integration

metacluster icon metacluster

R package for context-specific functionality analysis of metabolic gene clusters

methyliftover icon methyliftover

A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set

metvurst icon metvurst

meteorological visualisation utilities using R for science and teaching

microarray-analysis-1 icon microarray-analysis-1

Materials on the analysis of microarray expression data; focus on re-analysis of public data ( http://tinyurl.com/cruk-microarray)

microbiomehd icon microbiomehd

Cross-disease comparison of case-control gut microbiome studies

missingvalues icon missingvalues

R code for simulation of incomplete metabolomics data and imputation methods

missms icon missms

Missing Data Models for Label-Free Mass Spectrometry Proteomics

mixomics icon mixomics

Development repository for the Bioconductor package 'mixOmics '

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