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bio-pipeline

My collection of light bioinformatics analysis pipelines for specific tasks

bio-playground

miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.

biocode

Bioinformatics code libraries and scripts

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-1

bioinformatics-one-liners

Bioinformatics one liners from Ming Tang

bioinformatics-training-collection

A collection of resources for learning about tools and languages related to Bioinformatics

bioinformatics-with-python-cookbook-second-edition

Bioinformatics with Python Cookbook Second Edition, published by Packt

bioinformatics_script

cafe_fig

A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

cath-tools

Protein structure comparison tools such as SSAP and SNAP

ccmpred

Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.

cgat-apps

cgat-apps repository

chromosome_fusion

circexplorer2

circular RNA analysis toolset

clean

CLEAN: a contrastive learning model for high-quality functional prediction of proteins

codon-bias

Python package of codon usage bias analysis tools

colabdesign

Making Protein Design accessible to all via Google Colab!

colabfold

Making Protein folding accessible to all via Google Colab!

common_analyses

Repository of common bioinformatics scripts

competition-baseline

数据科学竞赛各种baseline代码、思路分享

compgwas

A python toolkit for comprehensive GWAS analysis of SNPs/Indels.

contigsmerger

Script to merge contigs generated using different de novo assembly methods

contig_merger

Perl script to merge assembled contigs that contain overlaps

convert_gff_id

cookiecutter-de_analysis_skeleton

Skeleton for new differential expression analysis project.

cuttag_tutorial

dastk

Differential ATAC-seq toolkit

deep-learning-with-python-notebooks

Jupyter notebooks for the code samples of the book "Deep Learning with Python"

deepchem

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology