yanjunzan / yeast-gge Goto Github PK

This is the analysis code for manuscript "Dynamic genetic architecture of yeast growth response to environmental perturbation shed light on origin of hidden genetic variation" Zan and Carlborg.

Author: Yanjun Zan Date: 2019-11-07 Version: V1

All the analysis are performed using customised code in R programming language (version V3.3.1) on a iMac (x86_64-apple-darwin13.4.0)

All analysis scripts are provided in ./bin and a summary of the analysis is avaliable as ./bin/Zan_carlborg_summary.R

Following R packages are required to run the script:
--GenABEL pakcage V1.8.0
--igraph package V1.2.1
--lmtest package V0.9-34
--corrplot package V0.77
which can be installed by typing install.package("PACKAGE_NAME")

For any questions regarding running the scripts, please contact: [email protected]