wesselb / gpar Goto Github PK

Hi!

I'm trying to use GPAR for a project, but I'm having some trouble with installation. I'm on macOS 10.15.7, and have tried both the method in the docs, using make, and using pip like in the README. I have gcc and gfortran-5. Error message below (it is the same in both cases) :

ERROR: Command errored out with exit status 1:
command: /Users/magnus/miniconda3/bin/python /Users/magnus/miniconda3/lib/python3.7/site-packages/pip install --ignore-installed --no-user --prefix /private/tmp/pip-build-env-b2vyz6fh/overlay --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- 'setuptools>=41.0' 'wheel>=0.33' 'numpy>=1.16' 'cython>=0.29'
cwd: None
Complete output (42 lines):
Traceback (most recent call last):
File "/Users/magnus/miniconda3/lib/python3.7/runpy.py", line 193, in _run_module_as_main
"main", mod_spec)
File "/Users/magnus/miniconda3/lib/python3.7/runpy.py", line 85, in _run_code
exec(code, run_globals)
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/main.py", line 26, in
sys.exit(_main())
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_internal/cli/main.py", line 73, in main
command = create_command(cmd_name, isolated=("--isolated" in cmd_args))
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_internal/commands/init.py", line 105, in create_command
module = importlib.import_module(module_path)
File "/Users/magnus/miniconda3/lib/python3.7/importlib/init.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "", line 1006, in _gcd_import
File "", line 983, in _find_and_load
File "", line 967, in _find_and_load_unlocked
File "", line 677, in _load_unlocked
File "", line 728, in exec_module
File "", line 219, in _call_with_frames_removed
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_internal/commands/install.py", line 17, in
from pip._internal.cli.req_command import RequirementCommand, with_cleanup
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_internal/cli/req_command.py", line 18, in
from pip._internal.index.collector import LinkCollector
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_internal/index/collector.py", line 14, in
from pip._vendor import html5lib, requests
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_vendor/requests/init.py", line 125, in
from . import utils
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_vendor/requests/utils.py", line 25, in
from . import certs
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_vendor/requests/certs.py", line 15, in
from pip._vendor.certifi import where
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_vendor/certifi/init.py", line 1, in
from .core import contents, where
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/pip/_vendor/certifi/core.py", line 12, in
from importlib.resources import path as get_path, read_text
File "/Users/magnus/miniconda3/lib/python3.7/importlib/resources.py", line 11, in
from typing import Iterable, Iterator, Optional, Set, Union # noqa: F401
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/typing.py", line 1373, in
class Callable(extra=collections_abc.Callable, metaclass=CallableMeta):
File "/Users/magnus/miniconda3/lib/python3.7/site-packages/typing.py", line 1024, in new
self._abc_registry = extra._abc_registry
AttributeError: type object 'Callable' has no attribute '_abc_registry'

ERROR: Command errored out with exit status 1: /Users/magnus/miniconda3/bin/python /Users/magnus/miniconda3/lib/python3.7/site-packages/pip install --ignore-installed --no-user --prefix /private/tmp/pip-build-env-b2vyz6fh/overlay --no-warn-script-location --no-binary :none: --only-binary :none: -i https://pypi.org/simple -- 'setuptools>=41.0' 'wheel>=0.33' 'numpy>=1.16' 'cython>=0.29' Check the logs for full command output.

Cheers!

I'm fitting a mid-sized time series model: two observations at 8k time points. There are some optimizations already available in GPAR, e.g. this can be fit with ~6k inducing points with some reasonable assumptions.

In the interest of performance, is it possible /advisable to try and enable GPU on the wrapped torch or tensorflow backends? The stheno, lab and plum-dispatch dependencies don't mention GPU support, but the flexibility they provide is tantalizing.

Dear senior,
I am a postgraduate of yunnan university,I recently research the paper about gpar and try to run the code which you write, however I meet some problems,I can't install the gpar ,my computer systerm is windows. If you can help me to cancel this problem,that's very nice for me.
Look forward to your reply.

Dear senior,

I recently research the paper about gpar and try to run the code which you write.
When dim(X)>1. these codes can be applied to implement?
If there are any examples or documentation how to do this, please send me in that direction (I cannot find any right now).

Best,
GHS