Comments (7)
Hi @nvladimus and @MathieuBo, as far as I understand this is not possible at the moment. However, it sounds quite reasonable so I will take a look and try to implement it.
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I added the option to save the transform parameters with #30. I plan to add a widget for the transformix so that you can also transform the labels inside napari.
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Hi, @ntatsisk ,
Many thanks for your update! Unfortunately I dropped the image processing part to focus of imaging and optics. So I can't test the new version at the moment. But I will return to it as soon as I resume image processing, possibly in a few months. Will be happy to test your plugin, provide feedback, and maybe even contribute!
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I would be very interested in being able to do that as well!
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Many thanks!
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Hi @nvladimus and @MathieuBo,
FYI
- I just added the transformix widget with #31 - to be released with the new version
- You can write the result images to disk by the PR InsightSoftwareConsortium/napari-itk-io#9 in
napari-itk-io
plugin that gets installed together with the current plugin - We are giving a demo about the elastix-napari plugin this week (SuperElastix/elastix#868). If you happen to drop by we could discuss your use cases - that would be interesting!
Let me know if you try the changes, and also about any other feature request :)
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Great! I am closing this, feel free to open a new issue if anything does not work as expected.
For a list of possible future features, you can take a look here: #35
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Related Issues (10)
- elastix_napari plugin is incompatible with magicgui=0.4.0 HOT 5
- Error when trying to register / change preset / use masks/ use advanced options HOT 1
- "pip install elastix_napari" does not work HOT 1
- Rename respository from elastix_napari to elastix-napari HOT 3
- Feature request ideas!
- Registration not working for 3D images
- Where to ask questions & submit issues!
- Invalid schema for package 'elastix-napari' HOT 5
- Type Error : Expecting argument of type itkImageSS2 or itkImageSourceISS2 HOT 4
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