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bbb-score

A script using RDKit to reproduce the BBB score reported by Gupta.

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

bcftools

This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

beginning-python-for-bioinformatics

benchmark

benchmarking

Results from the reproducibility and benchmarking studies presented in "Bringing Light Into the Dark: A Large-scale Evaluation of Knowledge Graph Embedding Models Under a Unified Framework" (http://arxiv.org/abs/2006.13365)

benchmarks

Comparison tools

benevolentai-dat

BenevolentAI's Diversity Analysis Tool (DAT) is a software package that can be used to produce demographic analysis reports given health data sets that contain for fields of age, sex, ethnicity, race and socio-economic status. For example, you might have a data about a cohort of patients and want to know how well you cover various ethnicities, age groups, sex groups and socio-economic status levels. Assuming your data sets have some of these fields, this software will help generate various views of the data to help inform your work. The DAT tool was developed as part of BenevolentAI's Diversity in Data Initiative, which aims to help improve the ways patients are represented in precision medicine. It is meant to help inspire other developers to find ways of assessing the data diversity in their current and prospective health data sets.

bert

TensorFlow code and pre-trained models for BERT

bert-pytorch

Google AI 2018 BERT pytorch implementation

bert4keras

keras implement of transformers for humans

best-readme-template

An awesome README template to jumpstart your projects!

bhtsne

Barnes-Hut t-SNE

bi-att-flow

Bi-directional Attention Flow (BiDAF) network is a multi-stage hierarchical process that represents context at different levels of granularity and uses a bi-directional attention flow mechanism to achieve a query-aware context representation without early summarization.

bidd-aggmap

Jigsaw-liked AggMap: A Robust and Explainable Multi-Channel Omics Deep Learning Tool

bidd-molmap

MolMapNet: An Efficient Convolutional Neural Network Based on Constructed Feature Maps for Molecular Deep Learning

bigdatamining

大数据分析与数据挖掘 百度云资源持续更新中，欢迎点赞star Min's blog 欢迎访问我的博客主页！(Welcome to my blog website !)https://liweimin1996.github.io/

bilm-tf

Tensorflow implementation of contextualized word representations from bi-directional language models

bimodal

Supporting code for the paper "Bidirectional Molecule Generation with Recurrent Neural Networks" (J. Chem. Inf. 2020, 60, 3).

binding-prediction

Summer 2022 Binding Prediction Models

biobert

BioBERT: a pre-trained biomedical language representation model

biobert-pretrained

BioBERT: a pre-trained biomedical language representation model for biomedical text mining

biofx_python

Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

biograkn

BioGrakn Knowledge Graph

bioinformatics

Tools for bioinformatics

bioinformatics-help-wanted

Find GitHub repos seeking contributions

biolink-model.js

A nodejs library to consume biolink model

biomedical-graph-visualizer

Biomedical Graph Visualizer (BGV)

biomedical-translation

**科学技术大学-微软亚洲研究院创新实践项目 医学文献翻译组

biomolecular-structures-analysis

Scripts to help scientists on analysis of 3D biomolecular structures or molecular dynamics simulations trajectories