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I'm a PhD student working on metabolomics, and I'm trying to aplly the MUMA package to my data. I'm new on R language, and when I run the function:
explore.data('C:/Users/elisa/Desktop/filemuma.csv', 'auto', scal = TRUE, normalize = TRUE, imputation = FALSE, imput), i got the error:
Error in if (x.x[i, j] <= 0) { : missing value where TRUE/FALSE needed
In addition: Warning message:
In Ops.factor(x.x[i, j], 0) : โ<=โ not meaningful for factors
Can you help me solving this error?
Best regards,
Elisabete
Keep getting this error.
Error in correctDrift(peakTable = batchB$peakTable, sampleGroups = batchB$meta$Samples, :
injection sequence is not in order
Please resort peakTable, injections and sampleGroups accordingly
Classes for meta data are correct when compared to the sample data so not sure what's wrong?
Cheers
Hi @RASpicer , as mentioned in #2 (comment)
people are uncertain how to add a new tool. What about adding a paragraph into the README ?
Yours, Steffen
Hi, The GPL3 applies more to software, and less to a collection of text.
I'd suggest to consider re-licensing to https://en.wikipedia.org/wiki/GNU_Free_Documentation_License
or one of the CreativeCommons versions (e.g. CC-BY). Yours, Steffen
Hi, since mzR now supports mz5, everything reading MS data
through one of these packages (mzR, ultimately ...) now also supports mz5,
e.g. decoMS2. But I am unsure how to mass-fix (pun intended ...) that. Yours, Steffen
Hi there --
I am wondering how one might add another tool to your (awesome!) list?
Thanks,
Jamie Collins
To all of the viewable tables add date of last update, as requested by @drupad_t
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