Git Product home page Git Product logo

hyposmia_analysis_pipeline's Introduction

hyposmia_analsis_pipeline

Summary

The complete analysis pipeline for the hyposmia project by Health After COVID-19 in Tyrol and CovILD Study Teams aiming at identification of recovery phenotypes of post-COVID-19 condition and resolution of post-COVID-19 olfactory dysfunction.


Terms of use

Please cite the repository, and our preprint (DOI: 10.1101/2022.06.02.22275932) or the peer-reviewed publication of the analysis results (DOI: 10.1007/s00405-023-08163-x). The raw .RData data files will be made available upon request to the study authors, Prof. Judith Löffler-Ragg and Prof. Raimund Helbok.

Usage

The following development packages are required to run the pipeline:

devtools::install_github('PiotrTymoszuk/soucer') ## script sourcing
devtools::install_github('PiotrTymoszuk/ExDA') ## exploratory data analysis and staristical hypothesis testing
devtools::install_github('PiotrTymoszuk/clustTools') ## factor analysis and unsupervised clustering
devtools::install_github('PiotrTymoszuk/somKernels') ## extra distances for self-organizing maps
devtools::install_github('PiotrTymoszuk/figur') ## management of figures and tables in Rmd documents
devtools::install_github('PiotrTymoszuk/trafo') ## handling of tabular data
devtools::install_github('PiotrTymoszuk/microViz') ## visualization

Source 'exec.R' to launch the entire pipeline:

source('exec.R')

Contact

The repository maintainer is Piotr Tymoszuk. Data requests should be addressed to Prof. Judith Löffler-Ragg and Prof. Raimund Helbok.

hyposmia_analysis_pipeline's People

Contributors

piotrtymoszuk avatar

Watchers

avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.