Comments (2)
I couldn't send it via email due to its large data size so I uploaded it here.
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Thanks for posting this issue @kenshukoiso ,
Upon inspection, it seems that your FMR header has x and y dimensions mixed up somehow. As a general advice, please use the latest version of BrainVoyager if you are creating these fmr files from dicom directly in BrainVoyager.
Nevertheless, I have created a new example to show how you can have lower level access to the FMR data (voxel values), that are the STC files which comes coupled with FMRs. For this, see 0d90ca8 . Direct access to STC files requires you to figure out the data dimensions manually. However, once done you can correctly convert your data to nifti (see below.)
![Screenshot 2024-05-18 at 10 25 20](https://private-user-images.githubusercontent.com/4668327/331779944-87793f6b-f316-478a-a966-f93add1d376d.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MTk3ODUzMzUsIm5iZiI6MTcxOTc4NTAzNSwicGF0aCI6Ii80NjY4MzI3LzMzMTc3OTk0NC04Nzc5M2Y2Yi1mMzE2LTQ3OGEtYTk2Ni1mOTNhZGQxZDM3NmQucG5nP1gtQW16LUFsZ29yaXRobT1BV1M0LUhNQUMtU0hBMjU2JlgtQW16LUNyZWRlbnRpYWw9QUtJQVZDT0RZTFNBNTNQUUs0WkElMkYyMDI0MDYzMCUyRnVzLWVhc3QtMSUyRnMzJTJGYXdzNF9yZXF1ZXN0JlgtQW16LURhdGU9MjAyNDA2MzBUMjIwMzU1WiZYLUFtei1FeHBpcmVzPTMwMCZYLUFtei1TaWduYXR1cmU9MjRlMTI3YjYwZmYwMTdiNTM2N2RmNThkZTk4ZTgxOWUwZmJmODg5ODk5YzgwZGI5MTRlYWU3ZmUxMTZjZjIzNSZYLUFtei1TaWduZWRIZWFkZXJzPWhvc3QmYWN0b3JfaWQ9MCZrZXlfaWQ9MCZyZXBvX2lkPTAifQ._7Mhlpr7INJZ4eSLzTHTVchjsCkIZPG_0PdvsCMlxr0)
![Screenshot 2024-05-18 at 10 24 46](https://private-user-images.githubusercontent.com/4668327/331779948-60bf917a-fbcd-4d55-b7db-eae3db2fca09.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.s_x9M89BWhe7S19cXQPXqTfeor148X3gtfPzI7HOipo)
from bvbabel.
Related Issues (20)
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