Name: Omer Faruk Gulban
Type: User
Company: Brain Innovation
Bio: I have received my PhD in 2020 from Maastricht University with my thesis titled "Imaging the human auditory system at ultra-high magnetic fields".
Twitter: ofgulban
Location: Maastricht, The Netherlands
Blog: https://orcid.org/0000-0001-7761-3727
Omer Faruk Gulban's Projects
Templates for the hackathon proceedings
A library for viewing songbird brain atlases (European starling, Canary, Zebra finch, Pigeon, Mustached bat)
BrainBox is a web application that let's you annotate and segment 3D brain imaging data in real time, collaboratively.
A lightweight Python library for reading & writing BrainVoyager file formats.
Simplex space operations for compositional data implemented in Python.
Various Nifti, Cifti, Gifti conversions...
How to make a clean pull request on Github
Resources from our human cortical auditory areas project.
Automated collection and reporting of citations for used software/methods/datasets
Particle simulations for exploding brains in Julia.
Creating mesmerizing brain animations by playing with geodesic distances.
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
A freesurfer segmentation pipeline optimised for 7T datasets
Create gifs from nifti files.
Subject-wise networks from structural MRI (thickness, gray matter density, curvature, gyrification)
Griffin Powermate Python library for Windows
A flexible DICOM converter for organizing brain imaging data into structured directory layouts
A command-line program for n-dimensional image enhancement and color balancing.
OHBM 2023 Brainhack project
Auxiliary scripts, bits & pieces built around LayNii
Processing scripts for in vivo mesoscopic MRI at 0.35 mm isotropic resolution.
Simple cython examples.
Simple Psychopy scripts.
MP2RAGE functions implemented in the way I understand better :)
NeuroElf (MATLAB)
Python package to access a cacophony of neuro-imaging file formats
Personal page https://ofgulban.github.io/.
Curated list of open-access databases with human structural MRI data
Schedule and resources from the OHBM Open Science Room: Rome 2019
Fragments FreeSurfer parcellation annotation in N-equal sized parcels