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catalyst's Introduction

My work focuses on single-cell, bioimage and spatial data analysis to understand immune-tumor interactions in various cancer types. I also build R/Bioconductor packages and workflows to standardize bioimage and spatial data analysis. You can see my main contributions on the BodenmillerGroup organisation.

GitHub statistics

Github stats

Ex-Package maintainer

Package Rank Build
cytomapper
imcRtools

Package contributor

Package Rank Build
cytoviewer
BASiCS
imcdatasets

Ex-Workflow maintainer

Workflow Build Website
IMCWorkflow https://bodenmillergroup.github.io/IMCWorkflow/
IMCDataAnalysis build https://github.com/BodenmillerGroup/IMCDataAnalysis

Analysis repositories

Repository Year
cytomapper_publication 2020
GammaDeltaTcells2018 2018
Spermatogenesis2018 2018
RegressionBASiCS2017 2017
ImmuneAging2017 2017
Platynereis2017 2017

catalyst's People

Contributors

catalyst-project avatar helenalc avatar hpages avatar kayla-morrell avatar lmweber avatar nturaga avatar vobencha avatar

Watchers

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