Nils Eling's Projects
BASiCS: Bayesian Analysis of Single-Cell Sequencing Data. This is an unstable experimental version. Please see http://bioconductor.org/packages/BASiCS/ for the official release version
R tools for the Bodenmiller lab
Random scripts to test handling of bioimage file formats as part of Bioconductor.
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
Teaching material for BTM 2016
Cytometry dATa anALYsis Tools
Common lab resources for processing sequencing data
Test repository for Github teaching
This repository hosts the scripts to reproduce the analysis presented in the practical session of "Tumors and the immune system 2022 - High dimensional spatial profiling of tumor microenvironment"
Adds an R implementation for the HistoCAT neightbourhood analysis that runs from CellProfiler output.
My personal website at https://nilseling.github.io/
Latex scripts to compile my PhD thesis
Repository containing the cytomapper slides presented at useR! 2021