Git Product home page Git Product logo

nagyistge / arvados Goto Github PK

View Code? Open in Web Editor NEW

This project forked from arvados/arvados

0.0 3.0 0.0 25.39 MB

an open source platform for managing and analyzing biomedical big data

Home Page: https://arvados.org

License: Other

Makefile 0.03% Ruby 34.80% JavaScript 7.06% CoffeeScript 0.02% HTML 5.83% CSS 0.72% Shell 2.62% Python 28.61% Go 17.65% Perl 1.83% Java 0.78% Nginx 0.04% ApacheConf 0.01%

arvados's Introduction

Arvados is a free software distributed computing platform for bioinformatics, data science, and high throughput analysis of massive data sets. Arvados supports a variety of cloud, cluster and HPC environments.

Arvados consists of:

  • Keep: a petabyte-scale content-addressed distributed storage system for managing and storing collections of files, accessible via HTTP and FUSE mount.

  • Crunch: a Docker-based cluster and HPC workflow engine designed providing strong versioning, reproducibilty, and provenance of computations.

  • Related services and components including a web workbench for managing files and compute jobs, REST APIs, SDKs, and other tools.

Quick start

Curoverse maintains an Arvados public cloud demo at https://cloud.curoverse.com. A Google account is required to log in.

To try out Arvados on your local workstation, you can use Arvbox, which provides Arvados components pre-installed in a Docker container (requires Docker 1.9+). After cloning the Arvados git repository:

$ cd arvados/tools/arvbox/bin
$ ./arvbox start localdemo

In this mode you will only be able to connect to Arvbox from the same host. To configure Arvbox to be accessible over a network and for other options see http://doc.arvados.org/install/arvbox.html for details.

Documentation

Complete documentation, including a User Guide, Installation documentation and API documentation is available at http://doc.arvados.org/

If you wish to build the Arvados documentation from a local git clone, see doc/README.textile for instructions.

Community

The [#arvados](irc://irc.oftc.net:6667/#arvados IRC) (Internet Relay Chat) channel at the Open and Free Technology Community (irc.oftc.net) is available for live discussion and support. You can use a traditional IRC client or join OFTC over the web.

The Arvados user mailing list is a forum for general discussion, questions, and news about Arvados development. The Arvados developer mailing list is a forum for more technical discussion, intended for developers and contributers to Arvados.

Development

Build Status Go Report Card

The Arvados public bug tracker is located at https://dev.arvados.org/projects/arvados/issues

Continuous integration is hosted at https://ci.curoverse.com/

Instructions for setting up a development environment and working on specific components can be found on the "Hacking Arvados" page of the Arvados wiki.

Licensing

Arvados is Free Software. See COPYING for information about Arvados Free Software licenses.

arvados's People

Contributors

tomclegg avatar cure avatar ldipenti avatar gitaway avatar mzats avatar jonam33 avatar jrandall avatar nouyang-curoverse avatar bcosc avatar qwrrty avatar nicocesar avatar brettcs avatar daftano avatar adambom avatar samshapiro avatar sguthrie avatar guillermo-carrasco avatar aflyhorse avatar tmooney avatar tetron avatar

Watchers

James Cloos avatar  avatar  avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.