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Michael R. Crusoe's Projects

macs icon macs

MACS -- Model-based Analysis of ChIP-Seq

maw icon maw

Metabolome Annotation Workflow

meetings icon meetings

Products from Working towards Sustainable Software for Science: Practice and Experiences (WSSSPE) activities

megadock icon megadock

An ultra-high-performance protein-protein docking for heterogeneous supercomputers

meryl-utility icon meryl-utility

A collection of miscellaneous code used by Meryl, Canu and others.

mgnify-pipeline-v5 icon mgnify-pipeline-v5

This repository contains all CWL descriptions of the MGnify pipeline version 5.0.

mimalloc icon mimalloc

mimalloc is a compact general purpose allocator with excellent performance.

miniwdl icon miniwdl

Workflow Description Language developer tools & local runner

mistune icon mistune

A fast yet powerful Python Markdown parser with renderers and plugins.

mmseqs2 icon mmseqs2

MMseqs2: ultra fast and sensitive search and clustering suite

mypy icon mypy

Optional static typing for Python

needle icon needle

A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences

nipy icon nipy

Neuroimaging in Python FMRI analysis package

nipype icon nipype

Workflows and interfaces for neuroimaging packages

obs-studio icon obs-studio

OBS Studio - Free and open source software for live streaming and screen recording

odgi icon odgi

optimized dynamic genome graph implementation

openmm icon openmm

OpenMM is a toolkit for molecular simulation using high performance GPU code.

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