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Hello World

I am Paul Hoffman, a senior bioinformatician with the Satija and Lappalainen Labs at the New York Genome Center. My work revolves around building software and for bioinformatic analyses, including an R package for analyzing single-cell data, along with several extension packages, and a pipeline for processing RNA-seq data. I work primarily in R and Python, but am always learning.

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blast_to_bed's Issues

convert xml from rnammer to bed

Hi,

Firstly, I would like to appreciate such a nice tool.
I recently run rnammer to identify rRNA loci in my genome.
Because my final goal is to mask rRNA loci from bam file for RNA-seq quantification, I need bed file.

rnammer produced either .xml or .gff file but unfortunately gff is version2. I could not find converter from gff2 to bed. So, I decided to convert xml to bed with your script.

Your script did not produce error but output bed was empty.
I am not familiar with xml format but I guess my xml might be somehow different from your specification.
I attach my xml below. If it’s not too much trouble, could you help me?
Thank you for your consideration.

<?xml version='1.0'?>
<output>
	<predictionTitle>Prediction of ribosomal RNA</predictionTitle>
	<predictor>RNAmmer-1.2</predictor>
	<reference>Lagesen K, Hallin PF, Rodland EA, Staerfeldt HH, Rognes T, Ussery DW. RNAmmer: consistent and rapid annotation of ribosomal RNA genes.2007;35(9):3100-8. Epub 2007 Apr 22</reference>
<predictionDate>2018-08-02</predictionDate>
	<entries>
		<entry>
			<mol>28s_rRNA</mol>
			<feature>rRNA</feature>
			<start>5183</start>
			<stop>8307</stop>
			<direction>-</direction>
			<score>840.8</score>
			<evalue>7.8e-254</evalue>
			<sequenceEntry>NW_019179066.1</sequenceEntry>
			<sequenceEntryLength>46280</sequenceEntryLength>
			<sequence>GCCCACAAAACCCTCTCTCTCCTGGGCTCGGGTGTCTGACAACGGGGCCCACTGGCAGCCCATTGTAATGGGTGGCAGATGTCAAGTAAATCTAAGTGTGAATTTTGACATTTGGCATACATTTGAATGGGGTGTCTTTTGGCCCAAATGTCAATTCCACAGCCCACAAAACCCTCTCTCTCCTGGGCTCGGGTGTCTGACAACGGGGCCCACTGGCAGCCCATTGTAATGGGTGGCAGATGTCAAGTAAATCTAAGTGTGAATTTTGACATTTGGCATACATTTGAATGGGGGGCCCCTGTTCCCATTTGTCAGACACCCAAGCCCTGTGAGAGAGGGGTTTTTGGGCTGTGGAGTTGACATTTAGGCCAAAAGAAACCCCATTCAAATGAATGCCAAATGTCAAAATTCACACTTAGATTTACTTGACAACTGCCACCCATTACAATGGGCTGCCAGTGGGCCCGGTTGTCAGACACCCGAGCCCAGGAGAGAGAGTGTTTTGTGGGCTGTGGAATTGACATTTGGGCCAAAAGAAACCCCATTCAAATGTACGCCAAGTGTCAAAATTCATACTTAGTGATTTTGACAAACGGGAAAACGGAGACCTCGTTCAAAGGCACGTGCACCTGCGCGTGCCGTTGCCCGTGCACCCGATCGTCAGACATCCGTGCCCAGGGGAGAGAGCGTTTTGTGGGCTGTGTAGTTGACATTTGGGCCAAAAAGATGGTTTTGGCTTGACAATCGGCATACTTTATAATGGGTTGACAAACGGGACCGTTTTTGACACGTCGCCCCTGAAATTTGACAATTGCCATACATTTGAATGGTGTTGAAATGTAAGGCAATTGTCGGGACATTTGCCTTACATTTACTATTGTCAAATGGGAAACATTTTGCCGAATGGGTTGACAAATGGGAAACATTTTGCCAAATAGGCTGACAAACGGGAAGTATTTTGACAATTCGAATACCTTTTAACCCCTTTGTCAATTTTGACAAATGGGAACAAAATTGGGCTTTTTGGCAAAATGTGACATTTTGCCAAATGGGAACATGTGTTCCCATTTGGCAAAAAAGTTCCCGATCGTCCGTAAATTTGAGACACCTGGTGGACGAAACGGGGTTGCGGGACAAATGGGAACAATGGCCCGAAACTTTGAAAAATCGCAGCGCGGGCCCCGGGGGCCCCCCGGGGCCGGGCTTCGGATCGGGGGCAGATCCGGCCCGGCCCCTCGCGCCGGCGCGGGAACGGTGCCCCCCGGGGCCTCGGTTCGGCCGTAGCGAATTTGACAAATGGGACCGTATTTTTCCCTAACCGTCGAATGGGCGCGTATGCCGTTTGGCAAATGGGCCCTAAGGCATCATAGAACAAGGTAGATAAGGGAAGTCGGCAAATCAGATCCGTAACTTCGGGATAAGGATTGGCTCTAAGGGCTGGGTCGGTCGGGCTGGGGTGCGAAGCGGGGCTGGGCTCGAGCCGCGGCTGGGGGAGCAGTCGCCCCGTCGCCCTCCTCTCTCCGCCGCCGGAAGCGCGGTGCGCGGCCCGTCTCGCGGGGCTCTCGTCCGCGGCGCCTCGTGCGTCGTCGGGCGGGGGTTTTCGCGGGGCGGTGTCCGACGCCGTGTGGAAGGCGGACCGGCGGGGGGATCGGGTACGGCGGTCGGCGGCGGCGACTCGACGCGCGCCGGGCCCTTCTCGCGGATCTCCCCAGCTACGGCGCCCGCTGGGTCCCGTTCACGCGGGCTTCCGCGGGTCGCCTCGGCTGGCGCCTAGCAGCTGACTTAGAACTGGTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCATCGCGAAGGCCCACGGGGGGTGTTGACGCGATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAATGAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTTGACGCGCATGAATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCTAGCGAAACCACAGCCAAGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACTGTGAAGAGACATGAGAGGTGTAAATAAGTGGGAGGCCTCGGCCGCCGGTGAAATACCACTACTCTTATCGTTTTTTCACTTACCCGGTGAGGCGGGGAGGCGAGCCCCGAGCGGGCTCTCGCTTCTGGTGTCAAGCGCCCGGCTCTGCCGGGCGTGACCCGCTCCGGGGACAGTGGCAGGTGGGGAGTTTGACTGGGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTATGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTGACTTTTTGGGTTTTAAGCAGGAGGTCAGAAAGTTACCACAGGGATAACTGGCTTGTGGCCCAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATGTGTTGTTGCAATAGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCTAGACGTAACATACCGTAGCGCCGCGGATCTTCGGTTGGCCCCGGATAGCCGGCTTCGGTCGGTGAGTAGAGCCGTTCGACAGGCTGGGGTGCGGCGCGGAGGTGGTGGTCGCCCCTCTCCTATCTCGACCGCATGTTTGTGGAGAACCTGGTGCTAAATCACTTGCAGCGACCTGATCTGGGTCAGGGTTCGTACGTAGCAGAGCAGCTCCCTCGCTGCGATCTATTGAATCAGCCCTTGATCCAAGCTTTTGTCGGCGCGCGCGGGCGCGGCCACCCCGACATTCCCCTCCCTGCTTCT</sequence>
			<model_string>actct.agcgatGGatcactt...ggctc.cg.atcg.atgAAGaacgcagcgaa.tgcgataagtaatgtggaattgcagcaatcccgtgaatcatcgaaactttGAAcgcaaattgcgccccgggaagccctttcctgggcctcccggg.gtatgcctgtatctgagtgtcgttaactcgtattgcgacctcagatcaggcg.GactAcccgctgAAcTTAAGCATATtATaagcggAGGAaaAGAAActAAccagGATTcccttAGTAacgGCGAgtGAAcagggAaAgcccagcgtcgaa........................................................................................................cccaagtccttcttggaacgag.c.ccatagAgGgtGa.agccccgtAGTcggttgcTTGggAaTgcAgccAAgtgggtGgtaaattcCatctAAggcTAAATAtaggcgggagacCGATAGcgaAcaAGTAccGtgAggGAAagttgaAAAgactttgaaaagag.agttaaAtAGtacgTGAAa.tcg..tt.agagggaagcggttggggcccgtgtagacgctcc.gc.ggaggattcaactctgccggtgttgggccgcctggccgggtgcccgcgga.c.gg.tttcgcgccg.gt.taccga.cc.ttcaaccgggcctttccctcctcaccgtaatcccggtgggtggggaggatgtggggagtggatttggtcttggggttgcttgcgggggcgggtggtcggggggcggcccggaccgcacgcgcgcggcgcattccgggcgtccggggtcgggcggccagcgtcgcggccccggatttcatggaatgttaacctgagggcttgactgggcccgggtggcctccgcgcgcctcgggagctccctcgggcccccgcggtggccctcgccaggcgcttcgttgttctgacgcccggggtctcgcgaacggcgtacccacccgggcaCcCGTCT...tGAAaCACGGaccAAGgAGtctaacat.tgtGCgAGtc..............................................................ggCgcaatgaaagtga...........................................................................................gt.tgAGcatactgttagGaCCCGAAAgatggtGAaCTAtgCctgagcagggtgAAGcCaagaggAAactctGgTGGAgGccgtagcggT.CTgACGtGCAAATcg...Tcgtc.gActtggGtaTaGggGcGAAAGaCtaATCGAaccatcTagTAGCTGGTTccctcCGAAgttTCcCtcAGGAtaGCtggagc......tttatc.gGTAaaGcgAaTGaTtagaggcattgGggacgcaaatcgatcTcaacctattctCAAACTttaAAt.gggtaag.............................ttcctaGTgGgCcatattttGGTAAGCagaactgGcgatgcGGgatgaaCCgaacgccgggtTaaggtgcc.aatatacacgccatttcaGAaCcacaAAaGgtgTtggttgaTataGACAgcaGGacgGTgGcCaTggAAGtcGgaAtCcgCTaAGGAgTGtGTaACAaCtCACctgctcCgAAtcaactaGccctgaAAA.TGgAtggcgctgaAgcggttacccAtacccggccgtgcgacgaGTAGgagggcgtgg.ggtcattacctgcgtcgaAgcctatgggcGtgagcccgggtggAgcggcc.ctagtgCagATCTTggtgG.taGTAgcaaatAttcaaatgagaactttgaagactgaaGtGGagaAgGgTTccatgtgaaCagcagTtg.acatgggttagtCggtcctaaggataggggaagcctcgAaagggaatcggTtaaAttccgaaccagacgaacccggagaccgccggcg.gag.ccccgcgcaggaagagttttctcttttcttttTaacagcc.g...cctggaatcgggtttacacccggagatgaggG.t.aa.ggctgagaaaagca.cg........g.gg.gt....cggtgcgctc.cg.cggcccttgaAaAatccgggggag.gattgtatatatgtatatacaactc.c.ccaggccGTACccataaCCgCAt...CAGGtctcCcaaGgtgaacag......cCtctggtc.gatagaa.AAtgtaggtaAGGGAAgTCGGCAAaataGaTccGTAActTcGggAtAAggatTGGCTCtga............................................................................................................................................................................................................................................................................................................................................................ttaGAACTggtacggacaaggggAatCcgACTGTtTAaTtAAAACAtAGcattgcGatggcccccattaaa.gggtgttgacgcaatgTGAtttCTGCCCAGTGCtctGAatGTcAaagtgaagaaaTtcaatccAaGCgCgGGTaAACGGCGGGaGTAActaTgACtCTcTtAAGGTAGCcAAATgcCTcGTCatctAAtTagt.GACGcGCATGAATGGAttAAcGAGaTTcccaCTGTCCCtatctactatctaGcGAAaCcaCagcCaaGGGAACGGgCttGgcagaatcaGtCGgGGaAAGAAGACCCTGTTGAGcTTgACtctAgtctggcattGtgaagagacat.agaggtgtAgatAagtGGgAGccccccgcgccccaagggatt.......cagTGaaAtACCactACtcttatcgttgttttaCTtAtcc................................................................................gaagAcattgtcaggtGGGGAGTTTGgCTGGGGCGGcacatctgttAaAcgatAaCgcaggtgTCCtAaGgtgagCTCAg.gaGaACaGAAAtctcacGtaGAgcAaaAAGggcAaAaGctcgctTgAttttgattttCagtacgaatacaaaccgtGAAAgcgtGGccTatcGATCCttta..cttcactaga.tttgaagctagaggtgtcagAaaAgtTACCaCAGGGATAACtGgcttgTggCgcCaAGcGttCatAgCGACgttGcttTTTgatcCtTCGATGTcGgcTCttcc.tAtCaTtgtgaaGcAgaattcac.AAgcGTtgGaTTGTTCAcCcactaatagggaaCGTGAgcTGgGTTtAGACCGtcGtgAgaCAGGTtaGTTtTAcCctactgat.......tgttgcgattagtaat.cagcttaGTACGAgAGGAaccgttg.ttcagacaattgGtttatgcggttggctga.cagccagtGctgcgaagctaccatctgttggattatgacTGaacgcctCtAAgtcagaAtcc.t.ct........................................................................................................................................................................................................................................................................................................tt.t</model_string>
			<match_string> c+c +a+ +     tc+ct+++ ggctc+ g++tc  a  A G    c  c+  + gc     gtaatg g   t gcag     + gt aa     g aa t t A  g  aat                  tt+         c+   +g+at c t    +tga                                gg g G ct    gc  AA       AT T+A                           ATTcc +    A+c          c+   A            +a +++++++++++++++++++++++++++ +  ++++++++ +++++ ++++ ++++  ++++++++ + ++++  ++   +++  +++++  +++++ + +++++c  a    c t  t+gaa+g+g+  cc          ++  ccc                                                           At+ g+  ga acC         caAG  c GtgAg GA  g t        tttg    g g+agt           TGA a+t+ +++ +a+ag  a  c +tt     c+ ++ a   + +c +     a  attca+ ++                                  +a  +++ +tt  c+ c   +++ c  + c +t                                                                                                                                                                                                                                                                                                              ggc  + cca   g    CcCG  T ++ GA aC CG  cc AGgAG    a    t tG g G   +  ++++ + ++++     ++++ +++    +++ ++++ ++    ++ + + ++++++ +  C +a tga   tga+   ++++    +++ + ++ ++  +   +++ ++ ++ ++ +++++ ++++  +++++ ++ ++++  ++ + + +  +++ ++++ +++g  +gAGc+t                   t gtG  CT tg   g   a  +t        g++ AAa               +   ggT+ Tg C tG  AATcg  +T  t  +   tggGt            GaC aA  G acc t               +t  GA +  TC C c  GA a  tg ++ ++ +++t  at  g                     a tgG g  g aaa +g                          t++gg aa +++ ++++ +++++  +++ +++++ +++t  c+a TgGg  a+att              t Gc     GGg tga    aa+   g+   a   tgcc aata  c                                     +GACA   GG   GT  +     AA tcG a  Cc  T              AaC C   tg     AAt          tga AA+TGg                 ac  A a + ggc       +   T G a+   gtg +  t++      gc  c aA    a     Gtg  cc         c       a    ag TC  g t G   GTA  aa   tt  a    ga    tg  g+ +gaa  GG g  g g   ca  tg          g+aca  gg     Cg+                                                      aac++ ga a   +cg  g g g+ ccc     gg+ g  ++                     c+g   cc gg  tcgg +t++     g agat   gG+++ ++ +ct       gc++cg + +     +gg+g ++++cgg gc  tc    cggcc t g  aA t  g+   a +g++    +              +t    cc+  ccGT         Cg At   C  Gt t Cc  G t+ +ca  +   +cCt  gg ++ atagaa+AA gtag taAGGGAAgTCGGCAAa +aGaTccGTAActTcGggAtAAggatTGGCTCt+a++++ +++ +++ +++++ ++++ +++  +++++++ ++++ ++ ++++++++ +++++ ++ + +++++++ +++++ ++ + + ++++++++++  ++++++ ++++++++++ + ++++++++ + ++ ++++++++++ ++ +++ ++ ++++++++++    ++++++++++ + +++ +++++ + ++  +++++ +++++++++++  ++++  ++++++ +++++++++++ + ++ ++++++++++++++  + +++++  + ++++ ++  ++++++++++ +++ ++++  + +++++++  +++++++ ++++ ++++ ++++++  ++ ++ + +ttaGAACTggt+cggac aggggAatCcgACTGTtTAaTtAAAACA+AGcat gcGa+ggccc     + + gggtgttgacgc atgTGAtttCTGCCCAGTGCtctGAatGTcAaagtgaagaaaTtcaa + AaGCgCgGGTaAACGGCGGGaGTAActaTgACtCTcTtAAGGTAGCcAAATgcCTcGTCatctAAtTagt+GACGcGCATGAATGGAt AAcGAGaTTcccaCTGTCCCta+ctactatctaGcGAAaCcaCagcCaaGG AACGGgCttGgcagaatcaG CGgGGaAAGAAGACCCTGTTGAGcTTgACtctAgtctggca+tGtgaagagacat+agaggtgtA atAagtGGgAG+c                 +t+++++++c gTGaaAtACCactACtcttatcgtt+ttt+aCTtA+cc++++ +++++++ ++++ ++++++ ++++++++++++++++++++++  ++++++++++++++++++++++ ++++++++g++gAca tg caggtGGGGAGTTTG+CTG GGCGG+aca+ctgt AaAcg tAaCgcaggtgTCCtAaGg+gagCTCAg gaG+ACaGAAA+ctc+cGt+GAgcA  AAGggcAaAaGctcgctTgAt+ttgattttCagta gaataca+accgtGAAAgcg GGccT +cGATCCtt + +ctt+  t g++ttt+aagc+ gaggt  cagA aAgtTACCaCAGGGATAACtGgcttgTggC  C AGcGttCatAgCGACgt+GcttTTTgatcCtTCGATGTcGgcTCttcc+tAtCaTtgtgaaGcAgaattcac+AAgcGTtgGaTTGTTCAcCcactaatagggaaCGTGAgcTGgGTTtAGACCGtcGtgAgaCAGGTtaGTTtTAcCctactgat+++++++tgttgc+a tagtaat+c+gct+aGTACGAgAGGAaccg++g+ttcagaca+ttgGt tatg g+ttggctga  agcca+tG+tgcgaagctaccatctgt+ggattatgacTGaacgcctCtAAgtcagaAtcc+++ct   + +  + + ++ +  + ++ +   +++++  ++  ++++   +  ++  ++++  ++  +   +    ++ +++  +   ++    + +  + +     +  +  ++ ++++++++++ ++++  ++ + + +++ +      +++  + ++   ++ +++ +  +  +++  +++   ++    +++ + + +  +    +  +++++++ ++ +  +++ ++   ++  +++++  +++   +++++ ++  + + + +   + +  ++ ++++  + +++++++++++ +tt t</match_string>
			<query_string>GCCCAcAAAACCCTCTCTCTCctgGGCTCgGGtGTCTgACAACGGGGCCCACTGGcAGCCCATTGTAATGGG---TGGCAG-----ATGTCAA-----GTAAATCTAAGTGTGAAT------------------TTTG-------ACATTTgGCATACAT----TTGA------------------------------ATGGGGtGTCTTTTGGCCCAA-------ATGTCA---------------------------ATTCCAC----AGC----------CCACAA------------AACcctctctctcctgggctcgggtgtctgacaacggggcccactggcagcccattgtaatgggtggcagatgtcaagtaaatctaagtgtgaattttgacatttggCATA----CAT--TTGAATGGGgGgCCCC--------TgTTCCC-----------------------------------------------------------ATTTGTCAGACACC---------CAAGCCCTGTGAGAGAGGGGT-------TTTTGGGCTGTGgAGT-----------TGACAtTTAggCCaAAAGAAACCCCATT-----CAAATGAA--TGCCAaATgTCAAAATTCACACT----------------------------------TAgAtTTaCTTGACAACTgCCaCCCATTaCAaTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGC--TGCCAGTGG---GCCCGGTTgtcAGACACCCGAGCCCAGGAGAGAGAGTGtTTTGTGGGCTgtggaattgacatttgggccaaaagaaaccccattcaaatgtacgccaagtgtcaaaattcaTACTTAGTGATTTTGAcaaacgggaaaacggagacctcgttcaaaggcacgtgcacctgcgcgtgccgttgcccgtgcacccgatcgtcagacatccgtgcccagggGAgAGAGCGTT------------------TTGTGGGCTGTGTA-GTTGACATTT------GGGCCAAA--------------AAGATGGTtTTGGCTTGACAATCGgcaTACTTtATAATGGGTT-----------GACAAACGGGACCGT---------------TTTTGACACGTCGCCCCTGAAATTTGACAAttgccaTACATTtG---------------------AATGGTGTTG-AAA-TG--------------------------TaAGGCAATtgtcgggacatttgccttacatttactatTGTCAAATGGGAAACATT--------------TTGCCGAATGGGTTGAC---AAATGGGAAACATTTTGCCaAATAGGC-------------------------------------TGACAAACGGGAAGTATTTTGACAATTCGAATACCTTTT-------------AACCCCTTTGT---CAATTT--------TGACAAaTGGGA---------------ACA-AAATTGGGC-------TTTTTGGCAAAATGTGAcATTTT------GC--CAAATGGGA-ACATGTGTTCC---------CATTTgGCAAAAAAGTTCCCGATCGtCCGTA--AA---TTTGA----GACACCTGGTGGACGAAACGGGGTTGCGGGACAAATGG---------GaACAATGGC---CCGA------------------------------------------------------AACTTTGAAAA-ATCGCAGcGCGgGCCCC----GGGGGCCCC---------------------CcGgggCCGGGCTTCGG-ATCGG--GGGCAGAT-CCGGcCcGGcCCCTC------GCGcCGgcgcgggaAcGGtGCccccCGGGGCC-TCgGTtCGGCCGTAGCGAA-TTTGACAAATgGGACCGTA--------------TTTtTcCCTAACCGT---------CGAATgggCGCGTATGCC--GTTTGGCAAatgggcCCTAAGGCAtCATAGAAcAAGGTAGATAAGGGAAGTCGGCAAATCAGATCCGTAACTTCGGGATAAGGATTGGCTCTAAgggctgggtcggtcgggctggggtgcgaagcggggctgggctcgagccgcggctgggggagcagtcgccccgtcgccctcctctctccgccgccggaagcgcggtgcgcggcccgtctcgcggggctctcgtccgcggcgcctcgtgcgtcgtcgggcgggggttttcgcggggcggtgtccgacgccgtgtggaaggcggaccggcggggggatcgggtacggcggtcggcggcggcgactcgacgcgcgccgggcccttctcgcggatctccccagctacggcgcccgctgggtcccgttcacgcgggcttccgcgggtcgcctcggctggcgcctagcagctgacTTAGAACTGGTGCGGACCAGGGGAATCCGACTGTTTAATTAAAACAAAGCATCGCGAAGGCCCA----CGGgGGGTGTTGACGCGATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAA-TGAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTtGACGCGCATGAATGGATGAACGAGATTCCCACTGTCCCTACCTACTATCTAGCGAAACCACAGCCAAGG-AACGGGCTTGGCAGAATCAG-CGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCACTGTGAAGAGACATgAGAGGTGTAAATAAGTGGGAGGC-----------------CTcggccgcCGGTGAAATACCACTACTCTTATCGTTTTTTCACTTACCCggtgaggcggggaggcgagccccgagcgggctctcgcttctggtgtcaagcgcccggctctgccgggcgtgacccgctccGGGGACAGTGGCAGGTGGGGAGTTTGACTG-GGCGGTACACCTGTCAAACGGTAACGCAGGTGTCCTAAGGCGAGCTCAGgGAGGACAGAAACCTCCCGTGGAGCA-GAAGGGCAAAAGCTCGCTTGATCTTGATTTTCAGTATGAATACAGACCGTGAAAGCGGGGCCTCACGATCCTTCTgaCTTT--TTGGgTTTTAAGCAGGAGGT--CAGA-AAGTTACCACAGGGATAACTGGCTTGTGGC--CCAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCtTATCATTGTGAAGCAGAATTCACcAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATgatgtgtTGTTGCAA-TAGTAATcCTGCTCAGTACGAGAGGAACCGCAGgTTCAGACATTTGGTGTATGTGCTTGGCTGAgGAGCCAATGGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCcGcCTagacgtaacataccgtagcgccgcggatcttcggttggccccggatagccggcttcggtcggtgagtagagccgttcgacaggctggggtgcggcgcggaggtggtggtcgcccctctcctatctcgaccgcatgtttgtggagaacctggtgctaaatcacttgcagcgacctgatctgggtcagggttcgtacgtagcagagcagctccctcgctgcgatctattgaatcagcccttgatccaagcttttgtcggcgcgcgcgggcgcggccaccccgacattcccctccctgcTTcT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>21263</start>
			<stop>21380</stop>
			<direction>+</direction>
			<score>51.4</score>
			<evalue>3.3e-16</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCCTGAACACGCCCGATCTCCGATCCGATCTCGAAGAGCTAAGCAGTCGGGCCTGGTTAGTACTGGATGGGAGAGACCGCCTGGAAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatC.cCaTccCGAaCtcgga..GttAAgccc.cgcGtcc.gAgt.agTAcT.................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+   +g aa ac CccgatC cC+ +cCGA+Ctcg a +G tAAgc+++cg+G cc+g gt+agTAcT++  +++ + +   +  tGg Aa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCcTG-AACACGCCCGATCtCCGATCCGATCTCGAAgaGCTAAGCAGtCGGG-CCtG-GTtAGTACTggatgggagagaccgccTGGAAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6303772</start>
			<stop>6303886</stop>
			<direction>+</direction>
			<score>89.9</score>
			<evalue>8.5e-28</evalue>
			<sequenceEntry>NW_019174404.1</sequenceEntry>
			<sequenceEntryLength>24919768</sequenceEntryLength>
			<sequence>ACGGCCATACCACCCTGAACACGCCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcagg.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa ac CccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACCcTG-AACACGCCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>13198</start>
			<stop>13313</stop>
			<direction>+</direction>
			<score>78.6</score>
			<evalue>2.2e-24</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAACACGCCCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAAGC</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaC.ccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa ac C+ccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta   +</match_string>
			<query_string>ACGGCCATaCCACtCTG-AACACGCcCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAAGC</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>18207</start>
			<stop>18317</stop>
			<direction>+</direction>
			<score>71.2</score>
			<evalue>3.7e-22</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTTGGGTTAGGTAGTACTTGGACGGAGACCGCTGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtccgAgt.agTAcT.............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G  +  g++agTAcT ++  ++ +   ++ ggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTtGGG-TTA-GGtAGTACTtggacggagaccgCTGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>7560</start>
			<stop>7673</stop>
			<direction>+</direction>
			<score>65.4</score>
			<evalue>2e-20</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTCGGGCTGGTTAGTTACTTGGACGGGAGACCCTCGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtccgAgt.ag.TAcT...............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G c+g gt+ag+TAcT ++  +++ +     +GggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTcGGG-CTG-GTtAGtTACTtggacgggagaccctCGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>35578</start>
			<stop>35680</stop>
			<direction>-</direction>
			<score>24.1</score>
			<evalue>5.5e-08</evalue>
			<sequenceEntry>NW_019185353.1</sequenceEntry>
			<sequenceEntryLength>50906</sequenceEntryLength>
			<sequence>TTAAAAAAAAAAAAAAAAGAACACGCCCGATCTCATCTGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTGCTTGGATGGGAGACCGCCTGGGCATACC</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT....tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string> +    A +  a + +  gaa ac CccgatC+CaTc  GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agT cT ++ tGggA acc       ctG    a  c+</match_string>
			<query_string>TTAAAAAAaAAAAaAaAAGAACACGCCCGATCTCATCT-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTGCTtggaTGGGAGACC---G--CCTGGG-CATACC</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>14251</start>
			<stop>14358</stop>
			<direction>+</direction>
			<score>35.8</score>
			<evalue>1.6e-11</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGCCATACCACTCTGAGCACGATCGTCCGATCTCGGAAGCCAAGCAGGTCGGGCCTGGTTAGTACTTGGACGCGGAGACAGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatC..cCaTccCGAaCtcgga.GttAAgcc.c.cgcGtcc.gAgt.agTAcT.................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG ccAt++ca+  +g g a          C ++C+Tcc GA+Ctcgga+G  AAgc+ ++cg+G cc+g gt+agTAcT ++  + ++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACG-CCATaCCACtCtGAGCA----------CgaTCGTCC-GATCTCGGAaGCCAAGCAgGtCGGG-CCtG-GTtAGTACTtggacgcggagacagccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>7088</start>
			<stop>7190</stop>
			<direction>+</direction>
			<score>33.7</score>
			<evalue>7.2e-11</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGGAAGCCAAGCACGGTCGGCTGGTTAGTACTTGGACGGCAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.cgcGtccgAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g g a            C+ cc GA+Ctcgga+G  AAgc+++ + +G c+g gt+agTAcT ++  ++  +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCtGAGCA------------CGCCC-GATCTCGGAaGCCAAGCAcGgTCGG-CTG-GTtAGTACTtggacggcagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>7946</start>
			<stop>8057</stop>
			<direction>+</direction>
			<score>56.9</score>
			<evalue>7.3e-18</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGGGGCTGGTTAGTACTTGATACGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgccc.cgcGtccgAgt.agTAcT.................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG ccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc++  g+G c+g gt+agTAcT +    +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACG-CCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAGgGGGG-CTG-GTtAGTACTtgatacgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>15016</start>
			<stop>15127</stop>
			<direction>+</direction>
			<score>38.0</score>
			<evalue>3.7e-12</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCAATACCACTCTGAGCACGCCCGATCTCCCGATCTCGGAAGCCAAGCAGGGTCAGGGCTGGTTAGTATTGACGGACGACCGGCCTGGGAATACAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgcc.At.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT...............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgcc+At++ca+  +g a  ac CccgatC+C  cc GA+Ctcgga+G  AAgc+ + ++ +G  c+g gt+agTA T+  ++  +   ++  tGggAa++c   +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCaATaCCACtCTG-AGCACGCCCGATCTC--CC-GATCTCGGAaGCCAAGCAgGgTcAGG-GCtG-GTtAGTATTgacggacgaccggccTGGGAATAC---A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>14761</start>
			<stop>14872</stop>
			<direction>-</direction>
			<score>53.8</score>
			<evalue>6.3e-17</evalue>
			<sequenceEntry>NW_019184650.1</sequenceEntry>
			<sequenceEntryLength>15498</sequenceEntryLength>
			<sequence>ACGGCCATACACTCTGAGCACGCCCGATCTCGTCCGATCTCGAAGCCAAGCAGGGTAGGGTAGGTTAGTACTTGGACGGCAGACCGCCTGGGAATACAAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcggaGttAAgcc.c.c.gcGtccgAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++  +  +g a  ac CccgatC+C+Tcc GA+Ctcg aG  AAgc+ + ++g+G   g gt+agTAcT ++  ++  +   +  tGggAa++c   +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCA-CtCTG-AGCACGCCCGATCTCGTCC-GATCTCGAAGCCAAGCAgGgTaGGG-TAG-GTtAGTACTtggacggcagaccgccTGGGAATACA--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>8705</start>
			<stop>8819</stop>
			<direction>+</direction>
			<score>72.9</score>
			<evalue>1.1e-22</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAAGCACGCCCGATCTCGTCCGATCTCGGGAAGCCAAGCAGGGTCGGGCTGGTTAGTACTTGGACGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga..GttAAgcc.c.c.gcGtccgAgt.agTAcT...............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g  a  ac CccgatC+C+Tcc GA+Ctcgg ++G  AAgc+ + ++g+G c+g gt+agTAcT ++  ++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCtGA-AGCACGCCCGATCTCGTCC-GATCTCGGGaaGCCAAGCAgGgTcGGG-CTG-GTtAGTACTtggacggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>21965</start>
			<stop>22082</stop>
			<direction>+</direction>
			<score>47.4</score>
			<evalue>5.4e-15</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCAATACCACTCTGAACACGCTGCCGATTCGTCCGATCTCGGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgcc.At.gcag.ggggaaaacaC.ccgatCcCaTccCGAaCtcgga..GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgcc+At++ca+  +g aa ac C  c    +C+Tcc GA+Ctcgg ++G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCaATaCCACtCTG-AACACGCtGCCGATTCGTCC-GATCTCGGGaaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>7175</start>
			<stop>7285</stop>
			<direction>+</direction>
			<score>56.4</score>
			<evalue>1e-17</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCAAGCAGGGTAGGGTTAGGTTAGTACTTGGACGGAGACCGCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT..............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG ccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G  + g gt+agTAcT ++  ++ +   + tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACG-CCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaG-CAAGCAgGgTaGGG-TTaG-GTtAGTACTtggacggagaccgcTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6208</start>
			<stop>6321</stop>
			<direction>-</direction>
			<score>73.6</score>
			<evalue>6.9e-23</evalue>
			<sequenceEntry>NW_019184650.1</sequenceEntry>
			<sequenceEntryLength>15498</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTCGGGCCTGGTTAGTACTTGGACGGGAGACCGCCTGGGAATACAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++c   +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTcGGG-CCtG-GTtAGTACTtggacgggagaccgccTGGGAATAC---A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>13448</start>
			<stop>13563</stop>
			<direction>+</direction>
			<score>19.7</score>
			<evalue>4.4e-07</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ATAAAAAAAATTAAAAAAAGCACGCCCGATCTCGTCCGATCTCGGAAGCAAAGCAGAGTCGGGCCTTGCAGATATATTATTGGCGGGAGGACCGCTGGGAATACCAGGTGTCTGTA</sequence>
			<model_string>gcGgccAt..gcagg.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT....................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>++    A ++  a  +   a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+   ++g+G cc+  g    TA T      ++ +++ ++   + tGggAa++cc  +  g+tG c t g+  </match_string>
			<query_string>ATAAAAAAaaTTAAAaAA-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCAAAGCAgAgTcGGG-CCtT-GCaGATA-TattattggcgggaggaccgcTGGGAATACC--A--GGTGTC-T-GT-A</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>69098</start>
			<stop>69212</stop>
			<direction>-</direction>
			<score>37.7</score>
			<evalue>4.5e-12</evalue>
			<sequenceEntry>NW_019175625.1</sequenceEntry>
			<sequenceEntryLength>98313</sequenceEntryLength>
			<sequence>AAGATTAAAAAAAAAAAAAACATGCCCGCTCTCGTCCGATCTCGGAGCCAAGCAGGGTTGGGCCTGGTTAGTACTTGGACGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcggaGttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+ G + A +  a + +   aa a  Cccg tC+C+Tcc GA+CtcggaG  AAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>AAGATTAAaAAAAaAaAA-AACATGCCCGCTCTCGTCC-GATCTCGGAGCCAAGCAgGgTtGGG-CCtG-GTtAGTACTtggacgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6791</start>
			<stop>6902</stop>
			<direction>+</direction>
			<score>42.4</score>
			<evalue>1.7e-13</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>AAGATTAAAAAAAAAAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTCGGCCTGGTTAGTACTTGGACGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcagggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.cgcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+ G + A +  a    g   ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + + +G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>AAGATTAAaAAAAAAAG--CACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTCGG-CCtG-GTtAGTACTtggacgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>17821</start>
			<stop>17933</stop>
			<direction>+</direction>
			<score>66.2</score>
			<evalue>1.2e-20</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGTGGGATTGGTTAGTACTTGGACGGCAGACCGCTTGGGAATACCAGGTGCTGTAAGTT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgccc.cgcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc++ +g+G  ++g gt+agTAcT ++  ++  +   +  tGggAa++cc  +  g+tGc+gta g+t</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAGgTGGG-ATtG-GTtAGTACTtggacggcagaccgctTGGGAATACC--A--GGTGCTGTAAGTT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>220</start>
			<stop>324</stop>
			<direction>+</direction>
			<score>38.6</score>
			<evalue>2.4e-12</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGGAAGCCAAGCACGGTCGGGCATGGTTAGTACTTGGACGGCAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g g a            C+ cc GA+Ctcgga+G  AAgc+++ ++g+G c +g gt+agTAcT ++  ++  +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCtGAGCA------------CGCCC-GATCTCGGAaGCCAAGCAcGgTcGGG-CAtG-GTtAGTACTtggacggcagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6304683</start>
			<stop>6304797</stop>
			<direction>-</direction>
			<score>88.9</score>
			<evalue>1.8e-27</evalue>
			<sequenceEntry>NW_019174404.1</sequenceEntry>
			<sequenceEntryLength>24919768</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAACACGCCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa ac CccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AACACGCCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>5931</start>
			<stop>6047</stop>
			<direction>+</direction>
			<score>55.1</score>
			<evalue>2.5e-17</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGCCATACCACTCTGAGCAGCGCCGATTCTCGTCCGATCTCGGAAGCCAAGCAGGGTTAGGGTTAGGTTGAGTACTTGGACGGCAGACCGCTTGGGAATACCAGGTGCTGTAACTT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c..gcGt.ccgAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG ccAt++ca+  +g g a  c Cc+ +tC+C+Tcc GA+Ctcgga+G  AAgc+ + +++g+Gt+  g +t agTAcT ++  ++  +   +  tGggAa++cc  +  g+tGc+gta  +t</match_string>
			<query_string>ACG-CCATaCCACtCtGAGCA-GCGCCGATTCTCGTCC-GATCTCGGAaGCCAAGCAgGgTtaGGGTtAGG-TTgAGTACTtggacggcagaccgctTGGGAATACC--A--GGTGCTGTAACTT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>13596</start>
			<stop>13710</stop>
			<direction>+</direction>
			<score>80.5</score>
			<evalue>5.8e-25</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAAACACGCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCATGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaC.ccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa acaC ccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G c +g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AA-ACACgCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CAtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>7728</start>
			<stop>7841</stop>
			<direction>-</direction>
			<score>65.5</score>
			<evalue>1.9e-20</evalue>
			<sequenceEntry>NW_019184650.1</sequenceEntry>
			<sequenceEntryLength>15498</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGTCTCGGAAGCCAAGCAGGGTCGGGCCTGGTTAGTACTTGGACGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc G +Ctcgga+G  AAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-G-TCTCGGAaGCCAAGCAgGgTcGGG-CCtG-GTtAGTACTtggacgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>12809</start>
			<stop>12922</stop>
			<direction>+</direction>
			<score>75.0</score>
			<evalue>2.6e-23</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAACACGCCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGTTATACTTGGATGGGTAGACCGCCCTGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgtagTAcT.................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa ac CccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G cc+g +t  TAcT ++  +++  +   +  + ggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AACACGCCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-TT-ATACTtggatgggtagaccgccCTGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>14631</start>
			<stop>14743</stop>
			<direction>+</direction>
			<score>51.3</score>
			<evalue>3.7e-16</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACAGCCATACCACTCTGAGCACGCCGATCTGTCCCGATCTCGGAAGCCAAGCAGGTTAGGGTGGGTTAGTACTGTGACGGCGAGCCGCTTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtccgAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+c gccAt++ca+  +g   a caC c    c +TccCGA+Ctcgga+G  AAgc+ ++++g+G   g gt+agTAcT+ +  ++ + +  +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACAGCCATaCCACtCTG---AGCACGCCGATCTGTCCCGATCTCGGAaGCCAAGCAgGtTaGGG-TGG-GTtAGTACTgtgacggcgagccgctTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>8331</start>
			<stop>8432</stop>
			<direction>+</direction>
			<score>36.3</score>
			<evalue>1.2e-11</evalue>
			<sequenceEntry>NW_019175433.1</sequenceEntry>
			<sequenceEntryLength>207134</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCGCGAGCACGTCCGATCTCGGAAGCCAAGCAGGGTCGGGCTGGTTAGTACTTGGACGAGACCGCCTGGGAATACCAGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtccgAgt.agTAcT..............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  + g a           C C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G c+g gt+agTAcT ++  + +   +  tGggAa++cc  +   +tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCgCG-AG----------CACGTCC-GATCTCGGAaGCCAAGCAgGgTcGGG-CTG-GTtAGTACTtggacgagaccgccTGGGAATACC--A---GTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6318</start>
			<stop>6432</stop>
			<direction>+</direction>
			<score>73.8</score>
			<evalue>6.2e-23</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTCGGGCTGGTTAGTACTTGGACGGGAACCGCGCTGGGAAATACCAGGTGCTGTAAGTT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtccgAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G c+g gt+agTAcT ++  +++    + + tGggAaa  c    g +tGc+gta g+t</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTcGGG-CTG-GTtAGTACTtggacgggaaccgcgcTGGGAAATAC--CAG-GTGCTGTAAGTT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>15156</start>
			<stop>15261</stop>
			<direction>-</direction>
			<score>61.2</score>
			<evalue>3.7e-19</evalue>
			<sequenceEntry>NW_019184650.1</sequenceEntry>
			<sequenceEntryLength>15498</sequenceEntryLength>
			<sequence>ACGGCCATACCAACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTCGGGCCTGGTTAGTACTTGGACGGGAGACCGCCTGGATACCGGTGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT....tGggAaacccgg.tcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca +  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G cc+g gt+agTAcT ++ +GggA acc   +   g t ccg   gct</match_string>
			<query_string>ACGGCCATaCCAAcTcTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTcGGG-CCtG-GTtAGTACTtggaCGGGAGACCGCCtG--GATACCGG-TGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>40102</start>
			<stop>40216</stop>
			<direction>-</direction>
			<score>33.1</score>
			<evalue>1.1e-10</evalue>
			<sequenceEntry>NW_019185353.1</sequenceEntry>
			<sequenceEntryLength>50906</sequenceEntryLength>
			<sequence>TTGATAATAAAAGAGAAAAAAAAAAAAAACACGCCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string> +G + At+  ag+g   aaaa a    a C C+ cc GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>TTGATAATaAAAGaGAA-AAAAAAAAAAAACACGCCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>17046</start>
			<stop>17159</stop>
			<direction>+</direction>
			<score>40.5</score>
			<evalue>6.6e-13</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCATACCACTCTGAGCACGCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGTCGGCCTGGTTAGTACTTGGACGGCCGAAACCGCCTGGGAATACCCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaC.ccgatCcCaTccCGAaCtcgga.GttAAgcc.c.cgcGtccgAgt.agTAcT..................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG  cAt++ca+  +g   a caC ccgatC+C+Tcc GA+Ctcgga+G  AAgc+ ++cg+  c+g gt+agTAcT ++  ++  +     +  tGggAa++cc    g +tGc+gta gct</match_string>
			<query_string>ACG-GCATaCCACtCTG---AGCACgCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGtCGGC-CTG-GTtAGTACTtggacggccgaaaccgccTGGGAATACC--CAG-GTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>17435</start>
			<stop>17546</stop>
			<direction>+</direction>
			<score>55.5</score>
			<evalue>2e-17</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCGACTCGTCCGATCTCGGAAGCCAAGCAGGCGGGGCATGGTTAGTACTTGACGGAGACCGCCTGGGAATACCAGGTGCTGTTAAGCTT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.cgcGtcc.gAgt.agTAcT..............tGggAaacccgg.tcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g   a caC c   C+C+Tcc GA+Ctcgga+G  AAgc+ ++ g+G c +g gt+agTAcT +  ++ +   +  tGggAa++cc g t  gctG +++ g +t</match_string>
			<query_string>ACGGCCATaCCACtCTG---AGCACGCCGACTCGTCC-GATCTCGGAaGCCAAGCAgGcGGGG-CAtG-GTtAGTACTtgacggagaccgccTGGGAATACCAGgT--GCTGTTAA-GCTT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>5819</start>
			<stop>5931</stop>
			<direction>-</direction>
			<score>55.7</score>
			<evalue>1.7e-17</evalue>
			<sequenceEntry>NW_019184650.1</sequenceEntry>
			<sequenceEntryLength>15498</sequenceEntryLength>
			<sequence>ACGCCATCCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTTGGGTAGGGTTAGTACTTGGACGGCAGACCGCTTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAtgcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG ccAt+ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G    g gt+agTAcT ++  ++  +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACG-CCATCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTtGGG-TAgG-GTtAGTACTtggacggcagaccgctTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6709</start>
			<stop>6816</stop>
			<direction>+</direction>
			<score>45.7</score>
			<evalue>1.8e-14</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCGATCTCGTCCGATCTCGGAAGCAAGCAGGTCGGGCCTGGTTAGTACTTGGACGCGGAAGCTGGGAATACCGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaC.ccgatCcCaTccCGAaCtcgga.GttAAgcc.c.cgcGtcc.gAgt.agTAcT.............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g   a caC ccgatC+C+Tcc GA+Ctcgga+G  AAgc+ ++cg+G cc+g gt+agTAcT ++  + ++  + tGggAa++cc     g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG---AGCACgCCGATCTCGTCC-GATCTCGGAaG-CAAGCAgGtCGGG-CCtG-GTtAGTACTtggacgcggaagcTGGGAATACC-----GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>15885</start>
			<stop>15999</stop>
			<direction>+</direction>
			<score>74.2</score>
			<evalue>4.7e-23</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGTGTGGGGCCTGGTTAGTACTTGGACGAGAGACGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGt.ccgAgt.agTAcT...............tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ ++ +g+G  c+g gt+agTAcT ++  + + +  +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGtGtGGGGcCTG-GTtAGTACTtggacgagagacgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>1</start>
			<stop>80</stop>
			<direction>-</direction>
			<score>6.8</score>
			<evalue>6.9e-06</evalue>
			<sequenceEntry>NW_019180561.1</sequenceEntry>
			<sequenceEntryLength>123</sequenceEntryLength>
			<sequence>ACGGTCATACCACTCTGAGCACGCCTGATCTCGTCCGATCCTGGAAGCCAAGCAGGGTCGGGCCTGGTTAGTACTTGGAC</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcTtGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGg+cAt++ca+  +g a  ac Cc gatC+C+Tcc GA+C  gga+G  AAgc+ + ++g+G cc+g gt+agTA           c  t           g  +</match_string>
			<query_string>ACGGTCATaCCACtCTG-AGCACGCCTGATCTCGTCC-GATCCTGGAaGCCAAGCAgGgTcGGG-CCtG-GTtAGTA-----------C--T-T-------G-GA-C</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>2964544</start>
			<stop>2964661</stop>
			<direction>-</direction>
			<score>42.7</score>
			<evalue>1.4e-13</evalue>
			<sequenceEntry>NW_019174574.1</sequenceEntry>
			<sequenceEntryLength>3370264</sequenceEntryLength>
			<sequence>CAAGCCATACCACTCTGAGCACGCCCGATCTCGTCCGATCTCGGAACCAAAGCAGGGTAGGGTGAGGGTTAGTACCTTGGACGAGCAAGACCGCTTGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGt.ccgAgt.agTAcT..................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>   gccAt++ca+  +g a  ac CccgatC+C+Tcc GA+Ctcgga+   AAgc+ + ++g+Gt   g gt+agTAc   ++  + +   +   + t ggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>CAAGCCATaCCACtCTG-AGCACGCCCGATCTCGTCC-GATCTCGGAaCCAAAGCAgGgTaGGGTgAGG-GTtAGTACCttggacgagcaagaccgcTTGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>6305369</start>
			<stop>6305483</stop>
			<direction>+</direction>
			<score>88.9</score>
			<evalue>1.8e-27</evalue>
			<sequenceEntry>NW_019174404.1</sequenceEntry>
			<sequenceEntryLength>24919768</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAACACGCCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa ac CccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ACGGCCATaCCACtCTG-AACACGCCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>8812</start>
			<stop>8924</stop>
			<direction>+</direction>
			<score>37.8</score>
			<evalue>4.1e-12</evalue>
			<sequenceEntry>NW_019192118.1</sequenceEntry>
			<sequenceEntryLength>9515</sequenceEntryLength>
			<sequence>ACGCCATACCACTCCTGAGCACGCCCGATCTCGTCCGATCTCGCGAAGCCAAGCAGGTTTGCCTGGTAGTACTTGGACGGACCAGACCGCCTGGGACTACCAGGTGCCTGTCA</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga..GttAAgcc.c.c.gcGtccgAgtagTAcT..................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cG ccAt++ca+   +g a  ac CccgatC+C+Tcc GA+Ctcg  ++G  AAgc+ ++++gc    g +  gTAcT ++  ++    +   +  tGggA ++cc  +  g+tGcc t g+c </match_string>
			<query_string>ACG-CCATaCCACtCcTG-AGCACGCCCGATCTCGTCC-GATCTCGCGaaGCCAAGCAgGtTtGCC-TGG-TA-GTACTtggacggaccagaccgccTGGGACTACC--A--GGTGCC-T-GTCA</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>18728329</start>
			<stop>18728443</stop>
			<direction>+</direction>
			<score>87.7</score>
			<evalue>3.8e-27</evalue>
			<sequenceEntry>NW_019174307.1</sequenceEntry>
			<sequenceEntryLength>23266897</sequenceEntryLength>
			<sequence>ACGGCCATACCACTCTGAACACGCCCGATCTCGTCCGATCTCGGAAGCTAAGCAGGGTCGGGCCTGGTTAGTACTTGGATGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCC</sequence>
			<model_string>gcGgccAt.gcag.ggggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>+cGgccAt++ca+  +g aa ac CccgatC+C+Tcc GA+Ctcgga+G tAAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gc+</match_string>
			<query_string>ACGGCCATaCCACtCTG-AACACGCCCGATCTCGTCC-GATCTCGGAaGCTAAGCAgGgTcGGG-CCtG-GTtAGTACTtggatgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCC</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>8114</start>
			<stop>8236</stop>
			<direction>-</direction>
			<score>33.1</score>
			<evalue>1.1e-10</evalue>
			<sequenceEntry>NW_019184650.1</sequenceEntry>
			<sequenceEntryLength>15498</sequenceEntryLength>
			<sequence>ATAATAAAAAAGAAAAAAAAAAAAAGCACGCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTTAGGGTTAGGGTTAGTACTTGGACGGCAGACCGCTTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt...gcag.g...gggaaaacaC.ccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c..gcGt.ccgAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>++  + A +++g a + +++   aaa caC ccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + +++g+Gt+  g gt+agTAcT ++  ++  +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ATAATAAAaaaGAAAaAaaaAA-AAAGCACgCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTtaGGGTtAGG-GTtAGTACTtggacggcagaccgctTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>8s_rRNA</mol>
			<feature>rRNA</feature>
			<start>5539</start>
			<stop>5654</stop>
			<direction>+</direction>
			<score>52.3</score>
			<evalue>1.8e-16</evalue>
			<sequenceEntry>NW_019175435.1</sequenceEntry>
			<sequenceEntryLength>24273</sequenceEntryLength>
			<sequence>ATAAAAAAAAAAAAAAAGAGCACGCCCGATCTCGTCCGATCTCGGAAGCCAAGCAGGGTCGGGCCTGGTTAGTACTTGGACGGGAGACCGCCTGGGAATACCAGGTGCTGTAAGCT</sequence>
			<model_string>gcGgccAt.gcag.g.gggaaaacaCccgatCcCaTccCGAaCtcgga.GttAAgcc.c.c.gcGtcc.gAgt.agTAcT................tGggAaacccggtcggctGccgtaggct</model_string>
			<match_string>++    A +  a + + g a  ac CccgatC+C+Tcc GA+Ctcgga+G  AAgc+ + ++g+G cc+g gt+agTAcT ++  +++ +   +  tGggAa++cc  +  g+tGc+gta gct</match_string>
			<query_string>ATAAAAAAaAAAAaAaAG-AGCACGCCCGATCTCGTCC-GATCTCGGAaGCCAAGCAgGgTcGGG-CCtG-GTtAGTACTtggacgggagaccgccTGGGAATACC--A--GGTGCTGTAAGCT</query_string>
		</entry>
		<entry>
			<mol>18s_rRNA</mol>
			<feature>rRNA</feature>
			<start>1</start>
			<stop>1282</stop>
			<direction>-</direction>
			<score>443.1</score>
			<evalue>4.1e-134</evalue>
			<sequenceEntry>NW_019179066.1</sequenceEntry>
			<sequenceEntryLength>46280</sequenceEntryLength>
			<sequence>ACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCAAGTCTAAGTACACACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGATCGCTCTCACGTTACTTGGATAACTGTGGCAATTCTAGAGCTAATACATGCAAACGAGCGCTGACCTCCGGGGATGCGTGCATTTATCAGATCCAAAACCCATGCGGTGCCTCTCGGGGTGCCCGGCCGCTTTGGTGACTCTAGATAACCTCGAGCCGATCGCTGGCCCCCGTGGCGGCGACGTCTCATTCGAATGTCTGCCCTATCAACTTTCGATGGTACTTTCTGTGCCTACCATGGTGACCACGGGGAACGGGGAATCAGGGTTCGATTCCGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGCGGCGCGCAAATTACCCACTCCCGACTCGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGACACTTTAAATCCTTTAACGAGGATCAATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATCTTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTCGGATCGAGCTGACGGTCCGCCGCGAGGCGAGCTACCGTCTGTCCCAGCCCCTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCTGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCTCAGCTAGGAATAATGGAATAGGACTCCGGTTCTATTTTGTGGTTTTCTTTCTGAACTGGGGCCATGATTAAAGAGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGTTCGAAGACGATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCAACTAGCGATCCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCGTCCGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGGCCCGGACACGGAAAGGATTGACAGATTGATAGCTCTCTATCTCTCTCT</sequence>
			<model_string>acctggttgatcctgccagtagtcatatgctagtgtctccaaaGatTaAgcCATGCAtGtcttaAGtacaaagctgatgcattttccttttatatcgggtctataaaggtaagaaactGcgaAtgGcTcatTAaatCagttatacagtt..................................................................................................................................................................................................attcaaaaatttctgccctATCAacTttccgGatggtagggTagtgGcctaccatGgttaggtaAcgggTaACggggaaTcaggGttcGAttccggAgAggGAGCCTGAGAaAcgGCTaccAcatCccAaGGaagGCcCAGCA..GGcggcgcAaaTTaccCAaTccccgagaaacactagggggGAggtAGtgAcgaaaaaaTgaatataAacaagagtacgggaggtctctcttcttcgtatctttccaatgacatagaggtcttgtaattggagaaaaAATGagtacaatttAaAtccgcTacgtaaacaatgctcctttaacgAGtgaAtcCaAttggaGGgccAAgtctgGTGCCAGCAgCcGCcGGgtTaATtCcAGctccaatAGtcgtatatt..................................................................................................................................................................................................................................................................................................tAttgcgtcgtcAGagGTgTgAAAttcttgGAtcgtcg.aaaGgAcgaaCtaaccagtGCccGAAaaggGCaagtttttgccCaaggatcgttTtacgatTttaaattcatttttcgaaTtCAAcacGacacgaAAGTaAGttaGggggatcgAAGacGTGaATcAGAtACCCgtcgTAgTcctacaCcaTAAACgATGccgac..............................................................ggttccggGGggAGTATtggtcaGCAtAaggcttggAAACTtAAAGgAATTGACGGaagggcAcCaCcAtcggaGtaGGGagGcctGcGGcTtTAatTtGactCAaCaCGgGTctaaAacTcACCaggtCtcggacacatgtaactgtgGgAttGACAaGAttTggAcagttaaagagagGcTCTTtCttggtGATtctgtgggcgCtggttggTGCATGGCCGttcttagttggTGgaaggtgattTGTaactggttaATTccaGatAACGgaacGAgggtAcccAtttatttcctctttgAAcgaGGAaTtcctaGTAagcgcgagTcAtcAggggctcgcgttGAtTacGTCCCTGcccttTGTACACACCGCCCGTCgctactaccgAtttgaatggtttaggtgAcgaaggtctttcgGActgggcgcccggggggggcccccgggggggaaaacttatagtgtaactaagcaggtctcgggtttgcggtcggccgctccgcgcgccccgagagtgtgtgccggtgAAgttgaccaaaAacttgatcatttagAggaagtaaAAGTCGtaacaaggtttccgtaggtgaacc</model_string>
			<match_string>acctggttgatcctgccagtag catatgct  tgtctc aaaGatTaAgcCATGCA Gtc taAGtaca a c g                ta c           +gt  gaaactGcgaAtgGcTcatTAaatCagttat  +gtt+++++  ++ +++++ + ++ +++   +  ++ +  +  ++++    ++  + + + +   +   + ++  +++++     + + + + +++ ++   +++    +++ + +  + ++++++    + +++  ++ ++++  +  ++++   +  ++++   ++  ++ ++  +++++ +  +  +  + ++++attc  +aat+tctgccctATCAacTttc  Gatggta   T +  GcctaccatGgt+  +  Acggg aACggggaaTcaggGttcGAttcc gAgAggGAGCCTGAGAaAcgGCTaccAcatCc AaGGaagGC  AGCA +GGc gcgcAaaTTaccCA+Tcc cga    c c    g gGAggtAGtgAcg aaaaaT       Aacaa   tac+ g g+   ctc           tttc          gagg+c+tgtaattgg      AATGag  ca+tttAaAtc                   ctttaacgAG g At CaAttggaGGgc AAgtctgGTGCCAGCAgCcGC GG  TaATtCcAGctccaatAG cgtat tt   ++++ ++  +++     + + ++ +++++ + + ++ + + + ++  +++  +  + + ++ + + +   ++ +++    +    ++  + + ++ +     + + ++ + ++ + ++ ++++   + +++++  +  + ++++  ++++      ++ + +++++    +  ++   +++ +  ++  +   +  + + ++  +  +++  + ++  +  ++++ + ++++++++++++ +++ ++   +++++   ++ ++   + ++  ++  +++++  ++ +tAttg g cg++AGag  gTgAAAttcttgGA+cg cg+a aG Acg aC  a+   +GC  GAAa   GCa    tttgc Caag+at gttTt c a Tt               aaT CAA   Ga acga    aAGt+ G+g g+tcgAAGacG   ATcAGAtAC CgtcgTAgT+c+  aCcaTAAACgATGcc+ac+  +  +++  +  + ++ +++++ +  +++ ++   +  + +++     ++    +++++ ggttccggGGggAGTA tggt+ GCA A +gct  gAAACTtAAAGgAATTGACGGaag gcAcCaCcA  ggaGt  GGag cctGcGGc tTAatTtGactCAaCaCGgG   aaA+cTcACC gg+C cggac                              A                                         gg                                        aa  gg        a                            t   c                      ag                                                                     Att ga  g t+t          +                                                    +++                                                                           ct + t                                              </match_string>
			<query_string>ACCTGGTTGATCCTGCCAGTAG-CATATGCT--TGTCTC-AAAGATTAAGCCATGCAAGTC-TAAGTACACA-CGG------------CCGGTA-C-----------AGT--GAAACTGCGAATGGCTCATTAAATCAGTTAT--GGTTcctttgatcgctctcacgttacttggataactgtggcaattctagagctaatacatgcaaacgagcgctgacctccggggatgcgtgcatttatcagatccaaaacccatgcggtgcctctcggggtgcccggccgctttggtgactctagataacctcgagccgatcgctggcccccgtggcggcgacgtctcATTC--GAATGTCTGCCCTATCAACTTTC--GATGGTACTTTCTGTGCCTACCATGGTG--ACCACGGGGAACGGGGAATCAGGGTTCGATTCC-GAGAGGGAGCCTGAGAAACGGCTACCACATCC-AAGGAAGGC--AGCAgcGGC-GCGCAAATTACCCACTCC-CGA----CTC----G-GGAGGTAGTGACG-AAAAAT-------AACAA---TACA-G-GA---CTC-----------TTTC----------GAGGCCCTGTAATTGG------AATGAGA-CACTTTAAATC-------------------CTTTAACGAG-G-AT-CAATTGGAGGGC-AAGTCTGGTGCCAGCAGCCGC-GG--TAATTCCAGCTCCAATAG-CGTATCTTaaagttgctgcagttaaaaagctcgtagttggatctcggatcgagctgacggtccgccgcgaggcgagctaccgtctgtcccagcccctgcctctcggcgccccctcgatgctcttagctgagtgtcccgcggggtccgaagcgtttactttgaaaaaattagagtgttcaaagcaggcccggtcgcctgaatacctcagctaggaataatggaataggactccggttctattttgtggttttctttctgaactggggccatgattaaagaggacggccgggggcattcgTATTGTGCCGCTAGAG--GTGAAATTCTTGGACCGGCGcA-AG-ACGGACG-AA---AGC--GAAA---GCA----TTTGC-CAAGAAT-GTTTT-C-A-TT---------------AAT-CAA---GA-ACGA----AAGTCGGAG-GTTCGAAGACG---ATCAGATAC-CGTCGTAGTTCCG-ACCATAAACGATGCCAACtagcgatccggcggcgttattcccatgacccgccgggcagcgtccggaaaccaaagtctttgGGTTCCGGGGGGAGTA-TGGTT-GCA-A-AGCT--GAAACTTAAAGGAATTGACGGAAG-GCACCACCA--GGAGT--GGAG-CCTGCGGC-TTAATTTGACTCAACACGGG---AAACCTCACCCGGCC-CGGAC------------------------------A----------------------------------------CGG------------------------------A---------AA--GG--------A----------------------------TTGAC----------------------AG---------------------------------------------------------------------ATT-GATAGCTCTCT--------A----------------------------------------------------TCT---------------------------------------------------------------------------CTCTCT----------------------------------------------</query_string>
		</entry>
	</entries>
</output>

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