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View Code? Open in Web Editor NEWSTASNet R package, performs a modified version of MRA to reverse engineer signalling networks.
License: GNU General Public License v3.0
STASNet R package, performs a modified version of MRA to reverse engineer signalling networks.
License: GNU General Public License v3.0
Hi,
I'm looking into using modular response analysis and came across your software. However I'm having difficulty installing with your instructions. I have successfully built and installed the c++ dependencies and the other R packages but following your instructions regarding how to install this package does not work. Here are your instructions:
Unix (MacOS, BSD, GNU/Linux) installation guide:
For a local installation, first create a folder for local R library in (e.g "home/<Username>/R")
Open shell go to the folder of the package (“MRA_Signaling”)
execute: R CMD INSTALL ./ (when recompiling use R CMD INSTALL --preclean ./)
Note: for some newer OS versions you have to specify the c++ version:
prior to installing the package execute:
export PKG_CXXFLAGS='`Rscript -e "Rcpp:::CxxFlags()"` -std=c++11’
Here's what I did:
home/<username>R
MRA_Signalling
this instruction is confusing - perhaps a name change and forgetting to update the instructions? I have instead copied the contents of this repo into home/<username>/R
and attempted the R install command from there.export
command, but this did not make a difference.Could you provide more comprehensive instructions regarding how to get this package working? Thanks
Ciaran
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