mathurind Goto Github PK
Name: Mathurin Dorel
Type: User
Company: MPIMG
Bio: Bioinformatician and systems biologist interested in cell signalling regulation in healthy cells and cancer.
Location: Berlin
Mathurin Dorel's Projects
apl
R package for computing Association Plots
clusterprofiler
:bar_chart: A universal enrichment tool for interpreting omics data
drugresistance
Helper functions to compute drug sensitivity and synergy from incucyte data (as read by the incucyter package by Florian Uhlitz)
extractlxb
Wrappers around the lxb library to process lxb files into MIDAS files for STASNet
genesetsimplifier
Helper functions to work with geneset enrichment.
incucyter
knithelpersstasnet
Helper functions when using knit with STASNet, such as caching models or processing MIDAS files
mathurind.github.io
pathview
pathway based data integration and visualization
processmidas
rbiohelp
Helper functions for analysis of biological datasets
rcpp
Seamless R and C++ Integration
stasnet
STASNet R package, performs a modified version of MRA to reverse engineer signalling networks.
wikiprofiler
Wikiprofiler to plot quantitative data on XML gene network/pathways.
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