A GNN model that executes simplification algorithms used in the layout phase of de novo genome assembly process.
License: MIT License
I have landed to this repo after going through the paper at https://arxiv.org/pdf/2011.05013.pdf.
I am trying to understand the code by running it in my local machine but found that dataset used is not provided as
train_path = 'data/train'
test_path = 'data/test'
which are relative paths.
By any chance, will you guys be able to provide me access to the data used please?
Hello,
I am trying to test this model on some other reads in FASTQ format. However, when I run the command, there is an error.
Then I went to ./vendor/raven/build, and found
Hence, we need to install Raven first, right?
Thanks for your help at first.
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