Git Product home page Git Product logo

Comments (3)

stelmanAM avatar stelmanAM commented on June 8, 2024 2

I had the same issue and this code change worked for me also. I had generated contact maps from hic files using juicer_tools dump, and the resulting scores are float values.

from 3dchromatin_replicateqc.

gbonilla18 avatar gbonilla18 commented on June 8, 2024

I had the same issue, since I generated the contact maps using juicer_tools. I wish it was better documented, but to be fair, the example provided by the authors shows counts as integer.
I just wish I had discovered this post sooner!
Thank you

from 3dchromatin_replicateqc.

Devalock avatar Devalock commented on June 8, 2024

Much aprreciated! I sincerely hope @oursu could modify this part, because most HiC contact normalization generate floats, so that future users won't have to spend hours struggling with where the problem is.

from 3dchromatin_replicateqc.

Related Issues (17)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.