Comments (2)
Hey @Chris-Cherry,
Thank you for the detailed report! While I'm not sure about how this specific error message was generated, I was able to reproduce it and I'm fairly sure that this was an issue with slingshot version 0.99.11 (there was a bug introduced in this version which has since been fixed). I tried rerunning your analysis with version 0.99.12 and it worked as expected, so can you try updating and see if that solves it?
Best,
Kelly
from slingshot.
Looks like it worked - Thanks!
Chris
from slingshot.
Related Issues (20)
- Plotting MST In UMAP Space HOT 2
- Increase the number of branching points HOT 2
- Error while running getLineages() HOT 4
- Unable to plot lines HOT 2
- slingshot plot(reducedDim(sds) error HOT 1
- Assign Seurat Colors to Slingshot plot HOT 3
- Trajectories behaving strangely using two different approaches HOT 3
- Warning messages useNames = NA is deprecated when running the slingshot HOT 13
- Error in h(simpleError(msg, call)) HOT 2
- Predicting cells belonging to two lineages constructed using two subsetted objects HOT 5
- Error in brewer_pal("qual", "Set2") HOT 2
- is it possible to set multiple start clusters in slingshot HOT 1
- How to use times parameter to inform about real time while not using clusterLabels HOT 2
- unexpected behaviour when specifying the start cluster HOT 2
- How Slingshot work on 90000 number of nuclei? HOT 6
- Is there any way that I could fit the NB-GAM for all the gene in my large dataset? HOT 1
- getCurves() Missing values HOT 8
- Curves and lineages HOT 3
- Error in igraph::shortest_paths(tree, from = l, to = ends, mode = "out", : At core/paths/dijkstra.c:360 : Weight vector must not contain NaN values, Invalid value HOT 3
- Average curve weights and Pseudotime HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from slingshot.