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OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning diagnostic tool development from high-throughput high-throughput omics experiments and other multidimensional datasets. Initially developed for miRNA-seq, RNA-seq and qPCR.

Home Page: https://kstawiski.github.io/OmicSelector/

License: Other

R 89.51% Shell 5.86% Dockerfile 0.78% C# 3.85%
feature-selection omics r r-package classification data-science data-mining bioinformatics bioinformatics-pipeline biomarkers

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omicselector's Issues

unable to download OmicSelector

I am unable to download OmicSelector because the dependency Biocomb can not be downloaded from CRAN or downloaded .gz file.
Do you have any suggestions?

mk.teratedRFE function isn't found

I'm testing some feature selection techniques and the technique Nº 55: iteratedRFECV isn't working, appears the following error:

Error in mk.iteratedRFE(trainSet = train, testSet = test, classLab = "Class", :
could not find function "mk.iteratedRFE"

I do not know what to do, i've already looked the github repository and didn't found the function or an way to solute this issue that im reving.

I'll be very happy and thankfull if you guys could help me with this.

Epitácio Farias.

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